RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 DEXIO95424 95 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 PAPLNO95428 1278 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 CNPP09543 421 aaKnown RBP12.26□□□□□ -0.45
COL11A1-207ENST00000465209 NPR3P17342 541 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 CA8P35219 290 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 DNM2P50570 870 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 ATAT1Q5SQI0 421 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 ASTLQ6HA08 431 aaPredicted RBP12.26□□□□□ -0.45
COL11A1-207ENST00000465209 TMC5Q6UXY8 1006 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 RUFY3Q7L099 469 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 CATSPER4Q7RTX7 472 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 PLCD3Q8N3E9 789 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 SMG8Q8ND04 991 aaKnown RBP12.26□□□□□ -0.45
COL11A1-207ENST00000465209 KLHL5Q96PQ7 755 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 DDX25Q9UHL0 483 aaKnown RBP12.26□□□□□ -0.45
COL11A1-207ENST00000465209 DBR1Q9UK59 544 aaKnown RBP12.26□□□□□ -0.45
COL11A1-207ENST00000465209 COL4A3BPQ9Y5P4 624 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 DOCK6Q96HP0 2047 aa12.26□□□□□ -0.45
COL11A1-207ENST00000465209 ZNF292O60281 2723 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 FANCMQ8IYD8 2048 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 DDX11L8A8MPP1 907 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 PSMA5P28066 241 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 QARSP47897 775 aaKnown RBP12.25□□□□□ -0.45
COL11A1-207ENST00000465209 CLCN5P51795 746 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 DSC1Q08554 894 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 SSRP1Q08945 709 aaKnown RBP12.25□□□□□ -0.45
COL11A1-207ENST00000465209 SPIRE1Q08AE8 756 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 BMS1Q14692 1282 aaKnown RBP12.25□□□□□ -0.45
COL11A1-207ENST00000465209 INF2Q27J81 1249 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 C15orf39Q6ZRI6 1047 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 CABP7Q86V35 215 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 PPFIBP1Q86W92 1011 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 HAS1Q92839 578 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 PGBD4Q96DM1 585 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 ZNF274Q96GC6 653 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-207ENST00000465209 JPH2Q9BR39 696 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-207ENST00000465209 TMEM175Q9BSA9 504 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 GBP3Q9H0R5 595 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 RSAD1Q9HA92 442 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 DUSP12Q9UNI6 340 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 PPME1Q9Y570 386 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 CNTNAP2Q9UHC6 1331 aa12.25□□□□□ -0.45
COL11A1-207ENST00000465209 NRP1O14786 923 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 SOD2P04179 222 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 NCLP19338 710 aaKnown RBP12.24□□□□□ -0.45
COL11A1-207ENST00000465209 RNASELQ05823 741 aaKnown RBP12.24□□□□□ -0.45
COL11A1-207ENST00000465209 LAMTOR4Q0VGL1 99 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 NONOQ15233 471 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL11A1-207ENST00000465209 PPP4R3AQ6IN85 833 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 GALNT17Q6IS24 598 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 CCDC149Q6ZUS6 474 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 KRT25Q7Z3Z0 450 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 SRGAP1Q7Z6B7 1085 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 C4orf19Q8IY42 314 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 COLGALT2Q8IYK4 626 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 TRIM22Q8IYM9 498 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 CMASQ8NFW8 434 aaPredicted RBP12.24□□□□□ -0.45
COL11A1-207ENST00000465209 PRPF31Q8WWY3 499 aaKnown RBP12.24□□□□□ -0.45
COL11A1-207ENST00000465209 TMEM143Q96AN5 459 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 PHF20Q9BVI0 1012 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 HERC2P3Q9BVR0 1158 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 RHOBTB2Q9BYZ6 727 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 XPNPEP1Q9NQW7 623 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 STK39Q9UEW8 545 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 KCNJ14Q9UNX9 436 aa12.24□□□□□ -0.45
COL11A1-207ENST00000465209 F8W810 466 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 EPB41L2O43491 1005 aaKnown RBP12.23□□□□□ -0.45
COL11A1-207ENST00000465209 PI15O43692 258 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 POMCP01189 267 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 P4HBP07237 508 aaKnown RBP12.23□□□□□ -0.45
COL11A1-207ENST00000465209 AOC1P19801 751 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 AMHR2Q16671 573 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 LETM2Q2VYF4 491 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 EARS2Q5JPH6 523 aaKnown RBP12.23□□□□□ -0.45
COL11A1-207ENST00000465209 TAS1R1Q7RTX1 841 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 FERMT3Q86UX7 667 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-207ENST00000465209 URGCPQ8TCY9 931 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 PSPC1Q8WXF1 523 aaKnown RBP12.23□□□□□ -0.45
COL11A1-207ENST00000465209 SLC7A3Q8WY07 619 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 CEP170P1Q96L14 293 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 FAM20AQ96MK3 541 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 LARP6Q9BRS8 491 aaKnown RBP12.23□□□□□ -0.45
COL11A1-207ENST00000465209 LXNQ9BS40 222 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 EIF2AQ9BY44 585 aaKnown RBP12.23□□□□□ -0.45
COL11A1-207ENST00000465209 RNF39Q9H2S5 420 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 KCNK12Q9HB15 430 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 MAN1C1Q9NR34 630 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 BMP2KQ9NSY1 1161 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-207ENST00000465209 IPPQ9Y573 584 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 CACNA1AO00555 2505 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 VWA8A3KMH1 1905 aa12.23□□□□□ -0.45
COL11A1-207ENST00000465209 ZBTB39O15060 712 aa12.22□□□□□ -0.45
COL11A1-207ENST00000465209 TBX3O15119 743 aa12.22□□□□□ -0.45
COL11A1-207ENST00000465209 TEX28O15482 410 aa12.22□□□□□ -0.45
COL11A1-207ENST00000465209 NARSO43776 548 aaKnown RBP12.22□□□□□ -0.45
COL11A1-207ENST00000465209 GAS2O43903 313 aaKnown RBP12.22□□□□□ -0.45
COL11A1-207ENST00000465209 TSPAN1O60635 241 aa12.22□□□□□ -0.45
COL11A1-207ENST00000465209 SSBP05455 408 aaKnown RBP eCLIP12.22□□□□□ -0.45
COL11A1-207ENST00000465209 SRGAP2CP0DJJ0 459 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms