RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 SOX4Q06945 474 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-204ENST00000465167 ITGA7Q13683 1181 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 PPP2R5BQ15173 497 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 PWP2Q15269 919 aaKnown RBP6.75□□□□□ -1.33
SSBP1-204ENST00000465167 PPM1JQ5JR12 505 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 TMEM201Q5SNT2 666 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 CXCL17Q6UXB2 119 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 MFSD6Q6ZSS7 791 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 EEPD1Q7L9B9 569 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 LSRQ86X29 649 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-204ENST00000465167 IQCA1Q86XH1 822 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 FBXO16Q8IX29 292 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-204ENST00000465167 RPUSD2Q8IZ73 545 aaKnown RBP6.75□□□□□ -1.33
SSBP1-204ENST00000465167 FAM133AQ8N9E0 248 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 OR6J1Q8NGC5 347 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 ESR2Q92731 530 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 FANCD2OSQ96PS1 177 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 RWDD1Q9H446 243 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-204ENST00000465167 DISC1Q9NRI5 854 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 DIAPH3Q9NSV4 1193 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 CYP39A1Q9NYL5 469 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 ANAPC4Q9UJX5 808 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 ADAM30Q9UKF2 790 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.75□□□□□ -1.33
SSBP1-204ENST00000465167 MYH6P13533 1939 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 ZMYM6O95789 1325 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 CCDC171Q6TFL3 1326 aa6.75□□□□□ -1.33
SSBP1-204ENST00000465167 LAMA4Q16363 1823 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.74□□□□□ -1.33
SSBP1-204ENST00000465167 ZNF213O14771 459 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 NKRFO15226 690 aaKnown RBP eCLIP6.74□□□□□ -1.33
SSBP1-204ENST00000465167 DHX16O60231 1041 aaKnown RBP6.74□□□□□ -1.33
SSBP1-204ENST00000465167 NMT2O60551 498 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 KPNA6O60684 536 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 FGBP02675 491 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 MYL3P08590 195 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 SPATA31C1P0DKV0 1188 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 ACTN1P12814 892 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 DRD2P14416 443 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 CSF2RAP15509 400 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 CALML3P27482 149 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 NTF4P34130 210 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 SLC16A2P36021 539 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 ALDH5A1P51649 535 aaPredicted RBP6.74□□□□□ -1.33
SSBP1-204ENST00000465167 SNAP25P60880 206 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 HAND2P61296 217 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 HDAC1Q13547 482 aaPredicted RBP6.74□□□□□ -1.33
SSBP1-204ENST00000465167 ALX1Q15699 326 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 MUM1L1Q5H9M0 696 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 FAM47CQ5HY64 1035 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 AKNAD1Q5T1N1 836 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 GPATCH4Q5T3I0 446 aaKnown RBP6.74□□□□□ -1.33
SSBP1-204ENST00000465167 ZBTB37Q5TC79 503 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 RNF207Q6ZRF8 634 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 FAM126BQ8IXS8 530 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 AGGF1Q8N302 714 aaeCLIP6.74□□□□□ -1.33
SSBP1-204ENST00000465167 C12orf50Q8NA57 414 aaPredicted RBP6.74□□□□□ -1.33
SSBP1-204ENST00000465167 RNF214Q8ND24 703 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 OTUD7AQ8TE49 926 aaPredicted RBP6.74□□□□□ -1.33
SSBP1-204ENST00000465167 TTC14Q96N46 770 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 WDR11Q9BZH6 1224 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 RANBP17Q9H2T7 1088 aaKnown RBP6.74□□□□□ -1.33
SSBP1-204ENST00000465167 ATXN3LQ9H3M9 355 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 GSX1Q9H4S2 264 aaPredicted RBP6.74□□□□□ -1.33
SSBP1-204ENST00000465167 KAT14Q9H8E8 782 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 IL23AQ9NPF7 189 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 TBX21Q9UL17 535 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 ZNF536O15090 1300 aa6.74□□□□□ -1.33
SSBP1-204ENST00000465167 A0A0D9SFI3 127 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 SLC22A31A6NKX4 558 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 DNAJA2O60884 412 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 FGAP02671 866 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 PGRP06401 933 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 PFKMP08237 780 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 ACRP10323 421 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 HSPD1P10809 573 aaKnown RBP6.73□□□□□ -1.33
SSBP1-204ENST00000465167 ITGB8P26012 769 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 COL8A1P27658 744 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 CYP2C18P33260 490 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 MRE11P49959 708 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 CDK7P50613 346 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 CHMP4BP1P59074 171 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 ETF1P62495 437 aaKnown RBP6.73□□□□□ -1.33
SSBP1-204ENST00000465167 NKX3-2P78367 333 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 NMIQ13287 307 aaPredicted RBP6.73□□□□□ -1.33
SSBP1-204ENST00000465167 SERINC3Q13530 473 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 BAATQ14032 418 aaPredicted RBP6.73□□□□□ -1.33
SSBP1-204ENST00000465167 RAB33AQ14088 237 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 USH1GQ495M9 461 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 DUSP28Q4G0W2 176 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 TMEM240Q5SV17 173 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 VPS53Q5VIR6 699 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 CCSAPQ6IQ19 270 aaPredicted RBP6.73□□□□□ -1.33
SSBP1-204ENST00000465167 ZNF365Q70YC5 407 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 DNERQ8NFT8 737 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 EXOC6Q8TAG9 804 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 SCFD2Q8WU76 684 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 HNRNPLLQ8WVV9 542 aaKnown RBP6.73□□□□□ -1.33
SSBP1-204ENST00000465167 TMEM40Q8WWA1 233 aa6.73□□□□□ -1.33
SSBP1-204ENST00000465167 FAM227BQ96M60 508 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms