RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 HOXA11P31270 313 aaPredicted RBP25.43■■□□□ 1.66
USP42-205ENST00000465073 PTPN5P54829 565 aa25.43■■□□□ 1.66
USP42-205ENST00000465073 NCAPH2Q6IBW4 605 aa25.43■■□□□ 1.66
USP42-205ENST00000465073 PPFIBP1Q86W92 1011 aa25.43■■□□□ 1.66
USP42-205ENST00000465073 ZNF280BQ86YH2 543 aa25.43■■□□□ 1.66
USP42-205ENST00000465073 PRSS33Q8NF86 280 aa25.43■■□□□ 1.66
USP42-205ENST00000465073 SLC22A17Q8WUG5 538 aa25.43■■□□□ 1.66
USP42-205ENST00000465073 ORC3Q9UBD5 711 aaPredicted RBP25.43■■□□□ 1.66
USP42-205ENST00000465073 EMC2Q15006 297 aa25.42■■□□□ 1.66
USP42-205ENST00000465073 ANKRD1Q15327 319 aa25.42■■□□□ 1.66
USP42-205ENST00000465073 XKR9Q5GH70 373 aa25.42■■□□□ 1.66
USP42-205ENST00000465073 ATAT1Q5SQI0 421 aa25.42■■□□□ 1.66
USP42-205ENST00000465073 RARS2Q5T160 578 aaKnown RBP25.42■■□□□ 1.66
USP42-205ENST00000465073 FERMT3Q86UX7 667 aa25.42■■□□□ 1.66
USP42-205ENST00000465073 POTEDQ86YR6 584 aa25.42■■□□□ 1.66
USP42-205ENST00000465073 DYDC2Q96IM9 177 aa25.42■■□□□ 1.66
USP42-205ENST00000465073 RSAD1Q9HA92 442 aa25.42■■□□□ 1.66
USP42-205ENST00000465073 CTDNEP1O95476 244 aa25.41■■□□□ 1.66
USP42-205ENST00000465073 ALDH2P05091 517 aa25.41■■□□□ 1.66
USP42-205ENST00000465073 SPIRE1Q08AE8 756 aa25.41■■□□□ 1.66
USP42-205ENST00000465073 UBXN11Q5T124 520 aa25.41■■□□□ 1.66
USP42-205ENST00000465073 C12orf76Q8N812 135 aaPredicted RBP25.41■■□□□ 1.66
USP42-205ENST00000465073 RNF149Q8NC42 400 aa25.41■■□□□ 1.66
USP42-205ENST00000465073 KREMEN2Q8NCW0 462 aa25.41■■□□□ 1.66
USP42-205ENST00000465073 FAM193BQ96PV7 902 aaPredicted RBP25.41■■□□□ 1.66
USP42-205ENST00000465073 C2CD4DB7Z1M9 353 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 EPCAMP16422 314 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 ANAPC15P60006 121 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 CTTNQ14247 550 aaKnown RBP25.4■■□□□ 1.66
USP42-205ENST00000465073 PCBP1Q15365 356 aaKnown RBP eCLIP25.4■■□□□ 1.66
USP42-205ENST00000465073 EARS2Q5JPH6 523 aaKnown RBP25.4■■□□□ 1.66
USP42-205ENST00000465073 KIAA1841Q6NSI8 718 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 UBALD2Q8IYN6 164 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 CNNM3Q8NE01 707 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 TMEM175Q9BSA9 504 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 VN1R3Q9BXE9 311 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 BRMS1Q9HCU9 246 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 UBN1Q9NPG3 1134 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 BMP2KQ9NSY1 1161 aaPredicted RBP25.4■■□□□ 1.66
USP42-205ENST00000465073 B4GALT3O60512 393 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 DDHD2O94830 711 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 WEE2P0C1S8 567 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 NCLP19338 710 aaKnown RBP25.4■■□□□ 1.66
USP42-205ENST00000465073 KRT2P35908 639 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 MTMR3Q13615 1198 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 MXD4Q14582 209 aaPredicted RBP25.4■■□□□ 1.66
USP42-205ENST00000465073 PTPN14Q15678 1187 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 CABP7Q86V35 215 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 TPH2Q8IWU9 490 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 MTRQ99707 1265 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 EMILIN2Q9BXX0 1053 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 SORCS3Q9UPU3 1222 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 FAN1Q9Y2M0 1017 aa25.4■■□□□ 1.66
USP42-205ENST00000465073 ZBTB39O15060 712 aa25.39■■□□□ 1.65
USP42-205ENST00000465073 DTNBO60941 627 aa25.39■■□□□ 1.65
USP42-205ENST00000465073 ERLIN2O94905 339 aa25.39■■□□□ 1.65
USP42-205ENST00000465073 SLITRK3O94933 977 aa25.39■■□□□ 1.65
USP42-205ENST00000465073 AVPR2P30518 371 aa25.39■■□□□ 1.65
USP42-205ENST00000465073 CYP4A11Q02928 519 aa25.39■■□□□ 1.65
USP42-205ENST00000465073 NR5A1Q13285 461 aa25.39■■□□□ 1.65
USP42-205ENST00000465073 ZDHHC14Q8IZN3 488 aa25.39■■□□□ 1.65
USP42-205ENST00000465073 USTQ9Y2C2 406 aa25.39■■□□□ 1.65
USP42-205ENST00000465073 AXLP30530 894 aa25.38■■□□□ 1.65
USP42-205ENST00000465073 AFF1P51825 1210 aaKnown RBP25.38■■□□□ 1.65
USP42-205ENST00000465073 PTENP60484 403 aa25.38■■□□□ 1.65
USP42-205ENST00000465073 NCBP1Q09161 790 aaKnown RBP25.38■■□□□ 1.65
USP42-205ENST00000465073 KANK3Q6NY19 840 aa25.38■■□□□ 1.65
USP42-205ENST00000465073 PLCD3Q8N3E9 789 aa25.38■■□□□ 1.65
USP42-205ENST00000465073 TDRD5Q8NAT2 981 aaKnown RBP25.38■■□□□ 1.65
USP42-205ENST00000465073 TNFRSF25Q93038 417 aa25.38■■□□□ 1.65
USP42-205ENST00000465073 CCDC51Q96ER9 411 aa25.38■■□□□ 1.65
USP42-205ENST00000465073 DBR1Q9UK59 544 aaKnown RBP25.38■■□□□ 1.65
USP42-205ENST00000465073 PCDHA12Q9UN75 941 aa25.38■■□□□ 1.65
USP42-205ENST00000465073 FAM205CA6NFA0 338 aa25.37■■□□□ 1.65
USP42-205ENST00000465073 LYPLA2O95372 231 aa25.37■■□□□ 1.65
USP42-205ENST00000465073 POMCP01189 267 aa25.37■■□□□ 1.65
USP42-205ENST00000465073 ITGA4P13612 1032 aa25.37■■□□□ 1.65
USP42-205ENST00000465073 FDPSP14324 419 aaKnown RBP25.37■■□□□ 1.65
USP42-205ENST00000465073 AK2P54819 239 aa25.37■■□□□ 1.65
USP42-205ENST00000465073 VCPP55072 806 aaKnown RBP25.37■■□□□ 1.65
USP42-205ENST00000465073 TFDP1Q14186 410 aa25.37■■□□□ 1.65
USP42-205ENST00000465073 KLHL5Q96PQ7 755 aa25.37■■□□□ 1.65
USP42-205ENST00000465073 EIF2AK1Q9BQI3 630 aaKnown RBP25.37■■□□□ 1.65
USP42-205ENST00000465073 MRPL17Q9NRX2 175 aaKnown RBP25.37■■□□□ 1.65
USP42-205ENST00000465073 NRP1O14786 923 aa25.36■■□□□ 1.65
USP42-205ENST00000465073 LILRB3O75022 631 aa25.36■■□□□ 1.65
USP42-205ENST00000465073 KLRC2P26717 231 aa25.36■■□□□ 1.65
USP42-205ENST00000465073 POU5F1BQ06416 359 aa25.36■■□□□ 1.65
USP42-205ENST00000465073 TCF15Q12870 199 aa25.36■■□□□ 1.65
USP42-205ENST00000465073 SMG8Q8ND04 991 aaKnown RBP25.36■■□□□ 1.65
USP42-205ENST00000465073 HSD17B14Q9BPX1 270 aa25.36■■□□□ 1.65
USP42-205ENST00000465073 SFXN1Q9H9B4 322 aa25.36■■□□□ 1.65
USP42-205ENST00000465073 XPNPEP1Q9NQW7 623 aa25.36■■□□□ 1.65
USP42-205ENST00000465073 ANKEF1Q9NU02 776 aa25.36■■□□□ 1.65
USP42-205ENST00000465073 INPPL1O15357 1258 aa25.35■■□□□ 1.65
USP42-205ENST00000465073 TSPAN1O60635 241 aa25.35■■□□□ 1.65
USP42-205ENST00000465073 BRD1O95696 1058 aa25.35■■□□□ 1.65
USP42-205ENST00000465073 CNPP09543 421 aaKnown RBP25.35■■□□□ 1.65
USP42-205ENST00000465073 CALCRLQ16602 461 aa25.35■■□□□ 1.65
USP42-205ENST00000465073 NOTUMQ6P988 496 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms