RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 CTNNBL1Q8WYA6 563 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 PIK3R5Q8WYR1 880 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 SAAL1Q96ER3 474 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 AGPAT1Q99943 283 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 TMEM117Q9H0C3 514 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 CHORDC1Q9UHD1 332 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 NR2E1Q9Y466 385 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 ZNF746Q6NUN9 644 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 C12orf56Q8IXR9 622 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 SYCE1Q8N0S2 351 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 BSNDQ8WZ55 320 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 RNF146Q9NTX7 359 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 AMFRQ9UKV5 643 aa20.25■□□□□ 0.83
TSPAN4-210ENST00000464987 CCDC169A6NNP5 214 aa20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 WDR64B1ANS9 1081 aa20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 KRIT1O00522 736 aa20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 DDX3YO15523 660 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 SORBS3O60504 671 aa20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 HSF2BPO75031 334 aa20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 ZBED4O75132 1171 aa20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 ZBTB7AO95365 584 aa20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 ALCAMQ13740 583 aa20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 FAM76AQ8TAV0 307 aa20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 POP1Q99575 1024 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 NEUROG2Q9H2A3 272 aa20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 MAP3K20Q9NYL2 800 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 AMACRQ9UHK6 382 aa20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 PHIPQ8WWQ0 1821 aa20.24■□□□□ 0.83
TSPAN4-210ENST00000464987 BAG6P46379 1132 aa20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 GMPSP49915 693 aaPredicted RBP20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 NNTQ13423 1086 aa20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 NAA35Q5VZE5 725 aa20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 ZNF862O60290 1169 aa20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 USP8P40818 1118 aa20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 MAP2K1Q02750 393 aaPredicted RBP20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 DALRD3Q5D0E6 543 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 ALS2CLQ60I27 953 aa20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 IQCKQ8N0W5 287 aa20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 TMEM161BQ8NDZ6 487 aa20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 SEMA4DQ92854 862 aa20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 CELF4Q9BZC1 486 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 ST6GALNAC4Q9H4F1 302 aa20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 TCEAL9Q9UHQ7 104 aa20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 GJA3Q9Y6H8 435 aa20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 MYH9P35579 1960 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-210ENST00000464987 ZNF233A6NK53 670 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 RGS20O76081 388 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 SGPL1O95470 568 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 NPTX2P47972 431 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 MXI1P50539 228 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 JAK3P52333 1124 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 SP4Q02446 784 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 DNAJC21Q5F1R6 531 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 KCTD16Q68DU8 428 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 RPUSD2Q8IZ73 545 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 SH2D3CQ8N5H7 860 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 TMEM174Q8WUU8 243 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 CCDC127Q96BQ5 260 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 FAM84AQ96KN4 292 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 ISCUQ9H1K1 167 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 TAF1DQ9H5J8 278 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 PPP1R1BQ9UD71 204 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 TBX20Q9UMR3 447 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 PFASO15067 1338 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 ANKRD62A6NC57 917 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 NR3C2P08235 984 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 CCDC172P0C7W6 258 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 COPB2P35606 906 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 BACE1P56817 501 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 ZNF211Q13398 564 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 HLTFQ14527 1009 aaKnown RBP eCLIP20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 ADAT2Q7Z6V5 191 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 CALR3Q96L12 384 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 KREMEN1Q96MU8 473 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 RUFY1Q96T51 708 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 PCDHB18PQ96TA0 734 aa20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 TOPORSQ9NS56 1045 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-210ENST00000464987 FGGP02679 453 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 FTLP02792 175 aaPredicted RBP20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 CNGA1P29973 690 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 HMGCS2P54868 508 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 KRT76Q01546 638 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 SNRNP35Q16560 246 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 SNRNP48Q6IEG0 339 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 AADACL2Q6P093 401 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 SLC39A4Q6P5W5 647 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 VSIG10LQ86VR7 867 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 REPS2Q8NFH8 660 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 MOV10L1Q9BXT6 1211 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 TMEM51Q9NW97 253 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 GABBR1Q9UBS5 961 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 CNOT7Q9UIV1 285 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 ADGRA3Q8IWK6 1321 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 DENND3A2RUS2 1198 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 GOLGA8KD6RF30 607 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 TTI1O43156 1089 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 RPS6KA5O75582 802 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 RFX1P22670 979 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 CETN1Q12798 172 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 CFAP58Q5T655 872 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms