RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 RPL10LQ96L21 214 aaKnown RBP8.05□□□□□ -1.12
PTCD3-205ENST00000464541 GPHA2Q96T91 129 aa8.05□□□□□ -1.12
PTCD3-205ENST00000464541 IL23AQ9NPF7 189 aa8.05□□□□□ -1.12
PTCD3-205ENST00000464541 ZNF277Q9NRM2 450 aaPredicted RBP8.05□□□□□ -1.12
PTCD3-205ENST00000464541 GPR45Q9Y5Y3 372 aa8.05□□□□□ -1.12
PTCD3-205ENST00000464541 RBP3P10745 1247 aa8.04□□□□□ -1.12
PTCD3-205ENST00000464541 EVA1CP58658 441 aa8.04□□□□□ -1.12
PTCD3-205ENST00000464541 SRSF2Q01130 221 aaKnown RBP8.04□□□□□ -1.12
PTCD3-205ENST00000464541 EXOSC10Q01780 885 aaKnown RBP8.04□□□□□ -1.12
PTCD3-205ENST00000464541 SPATS1Q496A3 300 aa8.04□□□□□ -1.12
PTCD3-205ENST00000464541 HS1BP3Q53T59 392 aa8.04□□□□□ -1.12
PTCD3-205ENST00000464541 MBNL2Q5VZF2 373 aaKnown RBP8.04□□□□□ -1.12
PTCD3-205ENST00000464541 FAM180AQ6UWF9 173 aa8.04□□□□□ -1.12
PTCD3-205ENST00000464541 CMTM4Q8IZR5 234 aa8.04□□□□□ -1.12
PTCD3-205ENST00000464541 C1orf162Q8NEQ5 155 aaPredicted RBP8.04□□□□□ -1.12
PTCD3-205ENST00000464541 LOXL4Q96JB6 756 aa8.04□□□□□ -1.12
PTCD3-205ENST00000464541 MPHOSPH9Q99550 1183 aa8.04□□□□□ -1.12
PTCD3-205ENST00000464541 ACE2Q9BYF1 805 aaPredicted RBP8.04□□□□□ -1.12
PTCD3-205ENST00000464541 SHTN1A0MZ66 631 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 GABRDO14764 452 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 FOXS1O43638 330 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 ZNF623O75123 536 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 PHF2O75151 1096 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 AGXTP21549 392 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 CDK17Q00537 523 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 SAFB2Q14151 953 aaKnown RBP eCLIP8.03□□□□□ -1.12
PTCD3-205ENST00000464541 GRM7Q14831 915 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 ADRM1Q16186 407 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 FUKQ8N0W3 1084 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 SNX33Q8WV41 574 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 OR14A2Q96R54 314 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 SLC13A1Q9BZW2 595 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 AGO3Q9H9G7 860 aaKnown RBP8.03□□□□□ -1.12
PTCD3-205ENST00000464541 CD248Q9HCU0 757 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 SMPD4Q9NXE4 827 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 PLA2G3Q9NZ20 509 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 RCAN3Q9UKA8 241 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 ZBTB21Q9ULJ3 1066 aa8.03□□□□□ -1.12
PTCD3-205ENST00000464541 TMEM127O75204 238 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 GYPEP15421 78 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 IARSP41252 1262 aaKnown RBP8.02□□□□□ -1.13
PTCD3-205ENST00000464541 ICAM4Q14773 271 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 UBE3CQ15386 1083 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 MUM1L1Q5H9M0 696 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 PGM2L1Q6PCE3 622 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 GLB1L3Q8NCI6 653 aaPredicted RBP8.02□□□□□ -1.13
PTCD3-205ENST00000464541 CHST13Q8NET6 341 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 Q8TCH9 128 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 TCF25Q9BQ70 676 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 ASPSCR1Q9BZE9 553 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 GREM2Q9H772 168 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 MKS1Q9NXB0 559 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 ING3Q9NXR8 418 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 SCOCQ9UIL1 159 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 MRFAP1Q9Y605 127 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 RPTORQ8N122 1335 aa8.02□□□□□ -1.13
PTCD3-205ENST00000464541 UBE2QL1A1L167 161 aa8.01□□□□□ -1.13
PTCD3-205ENST00000464541 GASTP01350 101 aa8.01□□□□□ -1.13
PTCD3-205ENST00000464541 COMTP21964 271 aa8.01□□□□□ -1.13
PTCD3-205ENST00000464541 CTSSP25774 331 aa8.01□□□□□ -1.13
PTCD3-205ENST00000464541 MAGEA10P43363 369 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-205ENST00000464541 NPEPPSP55786 919 aa8.01□□□□□ -1.13
PTCD3-205ENST00000464541 MALLQ13021 153 aa8.01□□□□□ -1.13
PTCD3-205ENST00000464541 BRDTQ58F21 947 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-205ENST00000464541 LCE4AQ5TA78 99 aa8.01□□□□□ -1.13
PTCD3-205ENST00000464541 FAXDC2Q96IV6 333 aa8.01□□□□□ -1.13
PTCD3-205ENST00000464541 CCDC8Q9H0W5 538 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-205ENST00000464541 TCAF1Q9Y4C2 921 aa8.01□□□□□ -1.13
PTCD3-205ENST00000464541 PRAMEF4O60810 478 aa8□□□□□ -1.13
PTCD3-205ENST00000464541 MYBL2P10244 700 aa8□□□□□ -1.13
PTCD3-205ENST00000464541 SELENOPP49908 381 aa8□□□□□ -1.13
PTCD3-205ENST00000464541 DUSP2Q05923 314 aa8□□□□□ -1.13
PTCD3-205ENST00000464541 MFSD5Q6N075 450 aa8□□□□□ -1.13
PTCD3-205ENST00000464541 FAM111BQ6SJ93 734 aa8□□□□□ -1.13
PTCD3-205ENST00000464541 MSL3Q8N5Y2 521 aaKnown RBP8□□□□□ -1.13
PTCD3-205ENST00000464541 GPR156Q8NFN8 814 aa8□□□□□ -1.13
PTCD3-205ENST00000464541 ZNF480Q8WV37 535 aa8□□□□□ -1.13
PTCD3-205ENST00000464541 FAM89AQ96GI7 184 aa8□□□□□ -1.13
PTCD3-205ENST00000464541 FUBP3Q96I24 572 aaKnown RBP eCLIP8□□□□□ -1.13
PTCD3-205ENST00000464541 C1QTNF3Q9BXJ4 246 aa8□□□□□ -1.13
PTCD3-205ENST00000464541 ENKD1Q9H0I2 346 aa8□□□□□ -1.13
PTCD3-205ENST00000464541 JAG2Q9Y219 1238 aa8□□□□□ -1.13
PTCD3-205ENST00000464541 KLHL33A6NCF5 533 aa7.99□□□□□ -1.13
PTCD3-205ENST00000464541 FZD9O00144 591 aa7.99□□□□□ -1.13
PTCD3-205ENST00000464541 MT-CO1P00395 513 aa7.99□□□□□ -1.13
PTCD3-205ENST00000464541 HHEXQ03014 270 aa7.99□□□□□ -1.13
PTCD3-205ENST00000464541 ACAP1Q15027 740 aa7.99□□□□□ -1.13
PTCD3-205ENST00000464541 ABCB5Q2M3G0 1257 aa7.99□□□□□ -1.13
PTCD3-205ENST00000464541 EDAQ92838 391 aa7.99□□□□□ -1.13
PTCD3-205ENST00000464541 BORCS6Q96GS4 357 aa7.99□□□□□ -1.13
PTCD3-205ENST00000464541 CDK5RAP1Q96SZ6 601 aaKnown RBP7.99□□□□□ -1.13
PTCD3-205ENST00000464541 DEF6Q9H4E7 631 aa7.99□□□□□ -1.13
PTCD3-205ENST00000464541 TLR9Q9NR96 1032 aa7.99□□□□□ -1.13
PTCD3-205ENST00000464541 RBM12Q9NTZ6 932 aaKnown RBP7.99□□□□□ -1.13
PTCD3-205ENST00000464541 DDX56Q9NY93 547 aaKnown RBP7.99□□□□□ -1.13
PTCD3-205ENST00000464541 B8ZZF3 427 aa7.98□□□□□ -1.13
PTCD3-205ENST00000464541 OSMP13725 252 aa7.98□□□□□ -1.13
PTCD3-205ENST00000464541 CRHR1P34998 444 aa7.98□□□□□ -1.13
PTCD3-205ENST00000464541 MSX2P35548 267 aaPredicted RBP7.98□□□□□ -1.13
PTCD3-205ENST00000464541 FOXL1Q12952 345 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms