RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 WNT3AP56704 352 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 CD69Q07108 199 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 RIN1Q13671 783 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 TCTN3Q6NUS6 607 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 GAREM2Q75VX8 874 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 POLNQ7Z5Q5 900 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 SSH1Q8WYL5 1049 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 GNRHR2Q96P88 292 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 OR14A2Q96R54 314 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 FDXACB1Q9BRP7 624 aaPredicted RBP5.51□□□□□ -1.53
CLK1-208ENST00000464454 PLA2G12BQ9BX93 195 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 QRSL1Q9H0R6 528 aaKnown RBP5.51□□□□□ -1.53
CLK1-208ENST00000464454 TCEAL9Q9UHQ7 104 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 RCAN3Q9UKA8 241 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 EDARQ9UNE0 448 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 A0A1W2PR48 441 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 ALDH1A2O94788 518 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 LTA4HP09960 611 aaKnown RBP5.5□□□□□ -1.53
CLK1-208ENST00000464454 GPR3P46089 330 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 DUSP8Q13202 625 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 ANO4Q32M45 955 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 INAVAQ3KP66 663 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 SPATS1Q496A3 300 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 FAM180AQ6UWF9 173 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 TAS1R1Q7RTX1 841 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 DNERQ8NFT8 737 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 TGFBRAP1Q8WUH2 860 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 RPL10LQ96L21 214 aaKnown RBP5.5□□□□□ -1.53
CLK1-208ENST00000464454 CCM2LQ9NUG4 571 aaPredicted RBP5.5□□□□□ -1.53
CLK1-208ENST00000464454 DNAJC28Q9NX36 388 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 SMPD4Q9NXE4 827 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 DPP7Q9UHL4 492 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 ZBTB21Q9ULJ3 1066 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 THRAP3Q9Y2W1 955 aaKnown RBP5.5□□□□□ -1.53
CLK1-208ENST00000464454 TCAF1Q9Y4C2 921 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 EID1Q9Y6B2 187 aa5.5□□□□□ -1.53
CLK1-208ENST00000464454 TNKSO95271 1327 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 SHTN1A0MZ66 631 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 TRIM75PA6NK02 468 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 ZNF623O75123 536 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 PARNO95453 639 aaKnown RBP5.49□□□□□ -1.53
CLK1-208ENST00000464454 MCL1Q07820 350 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 EFEMP1Q12805 493 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 GRM7Q14831 915 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 MUM1Q2TAK8 710 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 KCNK18Q7Z418 384 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 ADGRE4PQ86SQ3 457 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 ZBTB46Q86UZ6 589 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 CMIPQ8IY22 773 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 GPR135Q8IZ08 494 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 CMTM4Q8IZR5 234 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 FUKQ8N0W3 1084 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 CBARPQ8N350 705 aaPredicted RBP5.49□□□□□ -1.53
CLK1-208ENST00000464454 PIK3C3Q8NEB9 887 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 CHMP4CQ96CF2 233 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 MPHOSPH9Q99550 1183 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 PRDM12Q9H4Q4 367 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 IFT122Q9HBG6 1241 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 IL23AQ9NPF7 189 aa5.49□□□□□ -1.53
CLK1-208ENST00000464454 FOXS1O43638 330 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 PRAMEF4O60810 478 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 PHF2O75151 1096 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 MYBL2P10244 700 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 COMTP21964 271 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 CCND1P24385 295 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 MAGEA10P43363 369 aaPredicted RBP5.48□□□□□ -1.53
CLK1-208ENST00000464454 SELENOPP49908 381 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 NPEPPSP55786 919 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 ADAM8P78325 824 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 CDK17Q00537 523 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 SRSF2Q01130 221 aaKnown RBP5.48□□□□□ -1.53
CLK1-208ENST00000464454 HHEXQ03014 270 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 PTPN21Q16825 1174 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 C19orf54Q5BKX5 351 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 TOR2AQ5JU69 321 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 MBNL2Q5VZF2 373 aaKnown RBP5.48□□□□□ -1.53
CLK1-208ENST00000464454 PGM2L1Q6PCE3 622 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 BTNL9Q6UXG8 535 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 FATE1Q969F0 183 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 ARL8AQ96BM9 186 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 FAM89AQ96GI7 184 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 FUBP3Q96I24 572 aaKnown RBP eCLIP5.48□□□□□ -1.536e-7■■□□□ 13.5
CLK1-208ENST00000464454 CDK5RAP1Q96SZ6 601 aaKnown RBP5.48□□□□□ -1.53
CLK1-208ENST00000464454 GPHA2Q96T91 129 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 TCF25Q9BQ70 676 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 ACE2Q9BYF1 805 aaPredicted RBP5.48□□□□□ -1.53
CLK1-208ENST00000464454 DEF6Q9H4E7 631 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 AASDHPPTQ9NRN7 309 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 PLA2G3Q9NZ20 509 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 GPR45Q9Y5Y3 372 aa5.48□□□□□ -1.53
CLK1-208ENST00000464454 E2F8A0AVK6 867 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 MT-CO1P00395 513 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 GYPEP15421 78 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 IARSP41252 1262 aaKnown RBP5.47□□□□□ -1.53
CLK1-208ENST00000464454 MTNR1BP49286 362 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 KRT85P78386 507 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 DUSP2Q05923 314 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 SAFB2Q14151 953 aaKnown RBP eCLIP5.47□□□□□ -1.53
CLK1-208ENST00000464454 ICAM4Q14773 271 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 ABCB5Q2M3G0 1257 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms