RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 FCER1AP12319 257 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 ATP2A2P16615 1042 aaKnown RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 SCP2P22307 547 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 ALDH3A1P30838 453 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 TECP42680 631 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 MRPS35P82673 323 aaKnown RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 E2F5Q15329 346 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 UAP1Q16222 522 aaPredicted RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 DBN1Q16643 649 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 TMEM119Q4V9L6 283 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 ZCWPW2Q504Y3 356 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 ALKBH5Q6P6C2 394 aaKnown RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 PPP1R21Q6ZMI0 780 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 SYDE1Q6ZW31 735 aaPredicted RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 STXBP4Q6ZWJ1 553 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 CYFIP1Q7L576 1253 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 APBB1IPQ7Z5R6 666 aaPredicted RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 PNMA8AQ86V59 439 aaPredicted RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 RHOT2Q8IXI1 618 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 ZC3H3Q8IXZ2 948 aaKnown RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 AGGF1Q8N302 714 aaeCLIP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 LRRC57Q8N9N7 239 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 BBOF1Q8ND07 529 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 TPCN2Q8NHX9 752 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 ERMNQ8TAM6 284 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 SNX29Q8TEQ0 813 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 NSMCE1Q8WV22 266 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 CTNNBL1Q8WYA6 563 aaPredicted RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 KLHL29Q96CT2 875 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 ZNF837Q96EG3 531 aaPredicted RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 HES6Q96HZ4 224 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 ZNF317Q96PQ6 595 aaPredicted RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 CCDC77Q9BR77 488 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 TUBB6Q9BUF5 446 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 TMEM60Q9H2L4 133 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 VCXQ9H320 206 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 NLRC4Q9NPP4 1024 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 PRDM11Q9NQV5 511 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 TYW1Q9NV66 732 aaKnown RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 PANK4Q9NVE7 773 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 ARMCX3Q9UH62 379 aaPredicted RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 ADAMTS1Q9UHI8 967 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 NAGPAQ9UK23 515 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 SCN7AQ01118 1682 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 PASKQ96RG2 1323 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 A0A087X0T9 212 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 MYMKA6NI61 221 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 PP2D1A8MPX8 630 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 AHCYL1O43865 530 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 SSBP05455 408 aaKnown RBP eCLIP7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 KRT18P05783 430 aaKnown RBP7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 FAM228BP0C875 321 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 PDHBP11177 359 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 CYP19A1P11511 503 aaPredicted RBP7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 XRCC5P13010 732 aaKnown RBP7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 RARGP13631 454 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 CHN1P15882 459 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 ECHS1P30084 290 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 ADCY7P51828 1080 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 HSPA2P54652 639 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 HADHBP55084 474 aaKnown RBP7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 TFAP4Q01664 338 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 CENPCQ03188 943 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 RNASELQ05823 741 aaKnown RBP7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 CHRNDQ07001 517 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 KCNMA1Q12791 1236 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 MYO1EQ12965 1108 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 COASYQ13057 564 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 CALCOCO2Q13137 446 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 GAS6Q14393 721 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 TCEAL1Q15170 157 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 PDCD2Q16342 344 aaPredicted RBP7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 EXOC3L4Q17RC7 722 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 PARP6Q2NL67 630 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 WDR44Q5JSH3 913 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 HYIQ5T013 277 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 ZNF385CQ66K41 422 aaPredicted RBP7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 ARHGEF18Q6ZSZ5 1173 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 DAAM2Q86T65 1068 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 RNF135Q8IUD6 432 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 METTL13Q8N6R0 699 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 RFFLQ8WZ73 363 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 DTNBP1Q96EV8 351 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 GMCL1Q96IK5 515 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 FAXDC2Q96IV6 333 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 SERPINB12Q96P63 405 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 MTMR9Q96QG7 549 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 TXLNGYQ9BZA5 131 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 FOXP3Q9BZS1 431 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 PPCSQ9HAB8 311 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 RXFP1Q9HBX9 757 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 DCP1AQ9NPI6 582 aaPredicted RBP7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 NKIRAS1Q9NYS0 192 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 EHD2Q9NZN4 543 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 ANKIB1Q9P2G1 1089 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 KLHL14Q9P2G3 628 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 SALL4Q9UJQ4 1053 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 DOLKQ9UPQ8 538 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms