RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 PCDHB2Q9Y5E7 798 aa25.95■■□□□ 1.74
SSNA1-203ENST00000463511 COL4A3BPQ9Y5P4 624 aa25.95■■□□□ 1.74
SSNA1-203ENST00000463511 PTPN14Q15678 1187 aa25.94■■□□□ 1.74
SSNA1-203ENST00000463511 ATAT1Q5SQI0 421 aa25.94■■□□□ 1.74
SSNA1-203ENST00000463511 GALNT17Q6IS24 598 aa25.94■■□□□ 1.74
SSNA1-203ENST00000463511 TMC5Q6UXY8 1006 aa25.94■■□□□ 1.74
SSNA1-203ENST00000463511 ZNF280BQ86YH2 543 aa25.94■■□□□ 1.74
SSNA1-203ENST00000463511 ZNF579Q8NAF0 562 aaKnown RBP25.94■■□□□ 1.74
SSNA1-203ENST00000463511 SLC7A3Q8WY07 619 aa25.94■■□□□ 1.74
SSNA1-203ENST00000463511 GTF3C6Q969F1 213 aa25.94■■□□□ 1.74
SSNA1-203ENST00000463511 ZSCAN31Q96LW9 406 aaPredicted RBP25.94■■□□□ 1.74
SSNA1-203ENST00000463511 LIMD1Q9UGP4 676 aa25.94■■□□□ 1.74
SSNA1-203ENST00000463511 VAV3Q9UKW4 847 aa25.94■■□□□ 1.74
SSNA1-203ENST00000463511 KCNJ14Q9UNX9 436 aa25.94■■□□□ 1.74
SSNA1-203ENST00000463511 ZFHX2Q9C0A1 2572 aaPredicted RBP25.93■■□□□ 1.74
SSNA1-203ENST00000463511 H0Y858 1186 aa25.93■■□□□ 1.74
SSNA1-203ENST00000463511 QARSP47897 775 aaKnown RBP25.93■■□□□ 1.74
SSNA1-203ENST00000463511 ST3GAL1Q11201 340 aa25.93■■□□□ 1.74
SSNA1-203ENST00000463511 PPP2R5CQ13362 524 aa25.93■■□□□ 1.74
SSNA1-203ENST00000463511 AGMOQ6ZNB7 445 aa25.93■■□□□ 1.74
SSNA1-203ENST00000463511 CABP7Q86V35 215 aa25.93■■□□□ 1.74
SSNA1-203ENST00000463511 URGCPQ8TCY9 931 aa25.93■■□□□ 1.74
SSNA1-203ENST00000463511 PGBD4Q96DM1 585 aa25.93■■□□□ 1.74
SSNA1-203ENST00000463511 BMP2KQ9NSY1 1161 aaPredicted RBP25.93■■□□□ 1.74
SSNA1-203ENST00000463511 WRAP73Q9P2S5 460 aaPredicted RBP25.93■■□□□ 1.74
SSNA1-203ENST00000463511 CTDNEP1O95476 244 aa25.92■■□□□ 1.74
SSNA1-203ENST00000463511 SSBP05455 408 aaKnown RBP eCLIP25.92■■□□□ 1.74
SSNA1-203ENST00000463511 CPLX2Q6PUV4 134 aaKnown RBP25.92■■□□□ 1.74
SSNA1-203ENST00000463511 ZDHHC14Q8IZN3 488 aa25.92■■□□□ 1.74
SSNA1-203ENST00000463511 TMEM143Q96AN5 459 aa25.92■■□□□ 1.74
SSNA1-203ENST00000463511 CEP170P1Q96L14 293 aa25.92■■□□□ 1.74
SSNA1-203ENST00000463511 IRF2BPLQ9H1B7 796 aa25.92■■□□□ 1.74
SSNA1-203ENST00000463511 MINDY3Q9H8M7 445 aa25.92■■□□□ 1.74
SSNA1-203ENST00000463511 KCNMB3Q9NPA1 279 aa25.92■■□□□ 1.74
SSNA1-203ENST00000463511 SPDYE4A6NLX3 237 aa25.91■■□□□ 1.74
SSNA1-203ENST00000463511 GFRA3O60609 400 aa25.91■■□□□ 1.74
SSNA1-203ENST00000463511 DDHD2O94830 711 aa25.91■■□□□ 1.74
SSNA1-203ENST00000463511 SRGAP2CP0DJJ0 459 aa25.91■■□□□ 1.74
SSNA1-203ENST00000463511 AFF1P51825 1210 aaKnown RBP25.91■■□□□ 1.74
SSNA1-203ENST00000463511 FAM177A1Q8N128 213 aaPredicted RBP25.91■■□□□ 1.74
SSNA1-203ENST00000463511 TMEM105Q8N8V8 129 aa25.91■■□□□ 1.74
SSNA1-203ENST00000463511 PRPF31Q8WWY3 499 aaKnown RBP25.91■■□□□ 1.74
SSNA1-203ENST00000463511 PSPC1Q8WXF1 523 aaKnown RBP25.91■■□□□ 1.74
SSNA1-203ENST00000463511 DHX33Q9H6R0 707 aaKnown RBP25.91■■□□□ 1.74
SSNA1-203ENST00000463511 RSAD1Q9HA92 442 aa25.91■■□□□ 1.74
SSNA1-203ENST00000463511 USTQ9Y2C2 406 aa25.91■■□□□ 1.74
SSNA1-203ENST00000463511 CCDC194A0A1B0GVG4 234 aa25.9■■□□□ 1.74
SSNA1-203ENST00000463511 GALR2O43603 387 aaPredicted RBP25.9■■□□□ 1.74
SSNA1-203ENST00000463511 P4HBP07237 508 aaKnown RBP25.9■■□□□ 1.74
SSNA1-203ENST00000463511 PPFIBP1Q86W92 1011 aa25.9■■□□□ 1.74
SSNA1-203ENST00000463511 FAM20AQ96MK3 541 aa25.9■■□□□ 1.74
SSNA1-203ENST00000463511 SFXN1Q9H9B4 322 aa25.9■■□□□ 1.74
SSNA1-203ENST00000463511 MTCL1Q9Y4B5 1905 aaKnown RBP25.9■■□□□ 1.74
SSNA1-203ENST00000463511 DKC1O60832 514 aaKnown RBP eCLIP25.89■■□□□ 1.74
SSNA1-203ENST00000463511 DTNBO60941 627 aa25.89■■□□□ 1.74
SSNA1-203ENST00000463511 MCM2P49736 904 aa25.89■■□□□ 1.74
SSNA1-203ENST00000463511 NUBP1P53384 320 aa25.89■■□□□ 1.74
SSNA1-203ENST00000463511 LAMTOR4Q0VGL1 99 aa25.89■■□□□ 1.74
SSNA1-203ENST00000463511 UBXN11Q5T124 520 aa25.89■■□□□ 1.74
SSNA1-203ENST00000463511 SRGAP1Q7Z6B7 1085 aa25.89■■□□□ 1.74
SSNA1-203ENST00000463511 MRPL10Q7Z7H8 261 aaKnown RBP25.89■■□□□ 1.74
SSNA1-203ENST00000463511 NEK8Q86SG6 692 aa25.89■■□□□ 1.74
SSNA1-203ENST00000463511 PLCD3Q8N3E9 789 aa25.89■■□□□ 1.74
SSNA1-203ENST00000463511 KLHL5Q96PQ7 755 aa25.89■■□□□ 1.74
SSNA1-203ENST00000463511 FAM193BQ96PV7 902 aaPredicted RBP25.89■■□□□ 1.74
SSNA1-203ENST00000463511 LXNQ9BS40 222 aa25.89■■□□□ 1.74
SSNA1-203ENST00000463511 PHF20Q9BVI0 1012 aa25.89■■□□□ 1.74
SSNA1-203ENST00000463511 EMILIN2Q9BXX0 1053 aa25.89■■□□□ 1.74
SSNA1-203ENST00000463511 SH2B1Q9NRF2 756 aaPredicted RBP25.89■■□□□ 1.74
SSNA1-203ENST00000463511 VPS13AQ96RL7 3174 aa25.88■■□□□ 1.73
SSNA1-203ENST00000463511 POMCP01189 267 aa25.88■■□□□ 1.73
SSNA1-203ENST00000463511 CNPP09543 421 aaKnown RBP25.88■■□□□ 1.73
SSNA1-203ENST00000463511 KLRC2P26717 231 aa25.88■■□□□ 1.73
SSNA1-203ENST00000463511 HOXA11P31270 313 aaPredicted RBP25.88■■□□□ 1.73
SSNA1-203ENST00000463511 RFC5P40937 340 aa25.88■■□□□ 1.73
SSNA1-203ENST00000463511 CLCN4P51793 760 aa25.88■■□□□ 1.73
SSNA1-203ENST00000463511 PPP4R3AQ6IN85 833 aa25.88■■□□□ 1.73
SSNA1-203ENST00000463511 GPR149Q86SP6 731 aa25.88■■□□□ 1.73
SSNA1-203ENST00000463511 EXOC8Q8IYI6 725 aa25.88■■□□□ 1.73
SSNA1-203ENST00000463511 FAN1Q9Y2M0 1017 aa25.88■■□□□ 1.73
SSNA1-203ENST00000463511 CNTNAP2Q9UHC6 1331 aa25.88■■□□□ 1.73
SSNA1-203ENST00000463511 CCNT1O60563 726 aaKnown RBP25.87■■□□□ 1.73
SSNA1-203ENST00000463511 CDKL5O76039 1030 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 GCFC2P16383 781 aaKnown RBP25.87■■□□□ 1.73
SSNA1-203ENST00000463511 YWHABP31946 246 aaKnown RBP25.87■■□□□ 1.73
SSNA1-203ENST00000463511 EMC2Q15006 297 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 CCDC149Q6ZUS6 474 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 CCDC83Q8IWF9 413 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 RNF149Q8NC42 400 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 HAS1Q92839 578 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 TMEM175Q9BSA9 504 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 MFSD1Q9H3U5 465 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 GJB4Q9NTQ9 266 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 RGL1Q9NZL6 768 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 KANSL3Q9P2N6 904 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 STK39Q9UEW8 545 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 PPME1Q9Y570 386 aa25.87■■□□□ 1.73
SSNA1-203ENST00000463511 C2CD2LO14523 706 aa25.86■■□□□ 1.73
SSNA1-203ENST00000463511 NRP1O14786 923 aa25.86■■□□□ 1.73
SSNA1-203ENST00000463511 ALDH2P05091 517 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms