RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 SRGAP2BP0DMP2 458 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 U2AF2P26368 475 aaKnown RBP eCLIP13.24□□□□□ -0.297e-6■■□□□ 14.4
RTCB-202ENST00000463455 IRS1P35568 1242 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 ALDH7A1P49419 539 aaKnown RBP13.24□□□□□ -0.29
RTCB-202ENST00000463455 NDUFV1P49821 464 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 PTENP60484 403 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 NCBP1Q09161 790 aaKnown RBP13.24□□□□□ -0.29
RTCB-202ENST00000463455 COASYQ13057 564 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 GNL2Q13823 731 aaKnown RBP13.24□□□□□ -0.29
RTCB-202ENST00000463455 BMS1Q14692 1282 aaKnown RBP13.24□□□□□ -0.29
RTCB-202ENST00000463455 SMAD2Q15796 467 aaKnown RBP13.24□□□□□ -0.29
RTCB-202ENST00000463455 HAUS3Q68CZ6 603 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 MRPL10Q7Z7H8 261 aaKnown RBP13.24□□□□□ -0.29
RTCB-202ENST00000463455 KSR1Q8IVT5 923 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 GJD3Q8N144 294 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 RNF169Q8NCN4 708 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 MCPH1Q8NEM0 835 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 HELQQ8TDG4 1101 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 MSLNLQ96KJ4 702 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 TMEM60Q9H2L4 133 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 UBN1Q9NPG3 1134 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 XPNPEP1Q9NQW7 623 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 CD207Q9UJ71 328 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 ZMYM2Q9UBW7 1377 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 POTEMA6NI47 508 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 LAD1O00515 517 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 ERLIN2O94905 339 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 SRGAP2CP0DJJ0 459 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 SPATA31C1P0DKV0 1188 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 IL9P15248 144 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 RPA1P27694 616 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 HOXA11P31270 313 aaPredicted RBP13.23□□□□□ -0.29
RTCB-202ENST00000463455 ARL2P36404 184 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 MCM2P49736 904 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 FOSBP53539 338 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 GUCY1B3Q02153 619 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 DUSP6Q16828 381 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 NOMO2Q5JPE7 1267 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 TTC38Q5R3I4 469 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 NOTUMQ6P988 496 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 TMEM184AQ6ZMB5 413 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 EP400NLQ6ZTU2 488 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 ADHFE1Q8IWW8 467 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 SLC39A11Q8N1S5 342 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 SMRP1Q8NCR6 262 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 MICAL1Q8TDZ2 1067 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 NACC1Q96RE7 527 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 TLE6Q9H808 572 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 KANSL3Q9P2N6 904 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 HCSTQ9UBK5 93 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 PCDHB2Q9Y5E7 798 aa13.23□□□□□ -0.29
RTCB-202ENST00000463455 PI4K2BG5E9Z4 385 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 ZBTB39O15060 712 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 INPPL1O15357 1258 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 MBTPS2O43462 519 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 OFD1O75665 1012 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 NRIP1P48552 1158 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 BCAR1P56945 870 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 ERVFC1P60507 584 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 ZP2Q05996 745 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 DSG2Q14126 1118 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 GIT2Q14161 759 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 PPP1R15BQ5SWA1 713 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 TMEM92Q6UXU6 159 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 ADGRD2Q7Z7M1 963 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 CATSPER3Q86XQ3 398 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 URGCPQ8TCY9 931 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 TMEM169Q96HH4 297 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 TCF25Q9BQ70 676 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 RAB34Q9BZG1 259 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 IGFLR1Q9H665 355 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 MINDY3Q9H8M7 445 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 ENTPD7Q9NQZ7 604 aa13.22□□□□□ -0.29
RTCB-202ENST00000463455 C2orf72A6NCS6 295 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 GLP2RO95838 553 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 ALADP13716 330 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 NCLP19338 710 aaKnown RBP13.21□□□□□ -0.29
RTCB-202ENST00000463455 GTF2F1P35269 517 aaKnown RBP eCLIP13.21□□□□□ -0.29
RTCB-202ENST00000463455 DLX2Q07687 328 aaPredicted RBP13.21□□□□□ -0.29
RTCB-202ENST00000463455 KCNC3Q14003 757 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 PDIA5Q14554 519 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 SMC1AQ14683 1233 aaKnown RBP13.21□□□□□ -0.29
RTCB-202ENST00000463455 UBXN11Q5T124 520 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 HACE1Q8IYU2 909 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 TMC2Q8TDI7 906 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 PIGOQ8TEQ8 1089 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 PRIMPOLQ96LW4 560 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 RSAD1Q9HA92 442 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 TBC1D13Q9NVG8 400 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 CLEC1BQ9P126 229 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 IRAK3Q9Y616 596 aa13.21□□□□□ -0.29
RTCB-202ENST00000463455 INO80B-WBP1J3KQ70 363 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 LINC01565O15544 149 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 TSPAN1O60635 241 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 GPR37L1O60883 481 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 ZC3H11AO75152 810 aaKnown RBP eCLIP13.2□□□□□ -0.3
RTCB-202ENST00000463455 HOXB8P17481 243 aaPredicted RBP13.2□□□□□ -0.3
RTCB-202ENST00000463455 ATP2B1P20020 1258 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 GLRA2P23416 452 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 SSTR3P32745 418 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms