RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 UBL7Q96S82 380 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-211ENST00000463372 PCYT2Q99447 389 aa15.3■□□□□ 0.04
C9orf3-211ENST00000463372 TBC1D13Q9NVG8 400 aa15.3■□□□□ 0.04
C9orf3-211ENST00000463372 DNAJB4Q9UDY4 337 aa15.3■□□□□ 0.04
C9orf3-211ENST00000463372 TEP1Q99973 2627 aaKnown RBP15.29■□□□□ 0.04
C9orf3-211ENST00000463372 J3QKU1 62 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 MAP3K13O43283 966 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 RPP40O75818 363 aaKnown RBP15.29■□□□□ 0.04
C9orf3-211ENST00000463372 C1QL1O75973 258 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 SOD2P04179 222 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 PARP1P09874 1014 aaKnown RBP15.29■□□□□ 0.04
C9orf3-211ENST00000463372 CCDC192P0DO97 292 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 KCNA2P16389 499 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 SCAPQ12770 1279 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 TRAF1Q13077 416 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 PCNX4Q63HM2 1172 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 GLB1LQ6UWU2 654 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 FTSJ3Q8IY81 847 aaKnown RBP15.29■□□□□ 0.04
C9orf3-211ENST00000463372 DEFB124Q8NES8 71 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 GAB3Q8WWW8 586 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 SCUBE2Q9NQ36 999 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 DACT1Q9NYF0 836 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 INPP5FQ9Y2H2 1132 aa15.29■□□□□ 0.04
C9orf3-211ENST00000463372 EML5Q05BV3 1969 aa15.28■□□□□ 0.04
C9orf3-211ENST00000463372 ZBTB5O15062 677 aa15.28■□□□□ 0.04
C9orf3-211ENST00000463372 PPP1R11O60927 126 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-211ENST00000463372 STAT5BP51692 787 aa15.28■□□□□ 0.04
C9orf3-211ENST00000463372 NOMO2Q5JPE7 1267 aa15.28■□□□□ 0.04
C9orf3-211ENST00000463372 PLPPR4Q7Z2D5 763 aa15.28■□□□□ 0.04
C9orf3-211ENST00000463372 GPRASP2Q96D09 838 aa15.28■□□□□ 0.04
C9orf3-211ENST00000463372 SLC32A1Q9H598 525 aa15.28■□□□□ 0.04
C9orf3-211ENST00000463372 CCDC86Q9H6F5 360 aaKnown RBP15.28■□□□□ 0.04
C9orf3-211ENST00000463372 KAT14Q9H8E8 782 aa15.28■□□□□ 0.04
C9orf3-211ENST00000463372 TMEM9BQ9NQ34 198 aa15.28■□□□□ 0.04
C9orf3-211ENST00000463372 PKD2L1Q9P0L9 805 aa15.28■□□□□ 0.04
C9orf3-211ENST00000463372 PTPN13Q12923 2485 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 MYH9P35579 1960 aaKnown RBP15.27■□□□□ 0.04
C9orf3-211ENST00000463372 FAM221BA6H8Z2 402 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 H0Y626 953 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 TGM5O43548 720 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 GPR32O75388 356 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 ECI2O75521 394 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 ZMYND10O75800 440 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 TRIM16O95361 564 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 C1RP00736 705 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 VTNP04004 478 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 GLUD2P49448 558 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 NTHL1P78549 312 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 GAS6Q14393 721 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 DGKHQ86XP1 1220 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 BRD9Q9H8M2 597 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 ECHDC1Q9NTX5 307 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 FAN1Q9Y2M0 1017 aa15.27■□□□□ 0.04
C9orf3-211ENST00000463372 HMMRO75330 724 aa15.26■□□□□ 0.03
C9orf3-211ENST00000463372 ALDH2P05091 517 aa15.26■□□□□ 0.03
C9orf3-211ENST00000463372 CHRNB1P11230 501 aa15.26■□□□□ 0.03
C9orf3-211ENST00000463372 HOXA6P31267 233 aa15.26■□□□□ 0.03
C9orf3-211ENST00000463372 LRRC32Q14392 662 aa15.26■□□□□ 0.03
C9orf3-211ENST00000463372 ZKSCAN3Q9BRR0 538 aa15.26■□□□□ 0.03
C9orf3-211ENST00000463372 HERC2P3Q9BVR0 1158 aa15.26■□□□□ 0.03
C9orf3-211ENST00000463372 RXFP1Q9HBX9 757 aa15.26■□□□□ 0.03
C9orf3-211ENST00000463372 NOTCH4Q99466 2003 aa15.26■□□□□ 0.03
C9orf3-211ENST00000463372 LNP1A1A4G5 178 aa15.25■□□□□ 0.03
C9orf3-211ENST00000463372 PTGDRQ13258 359 aa15.25■□□□□ 0.03
C9orf3-211ENST00000463372 UAP1L1Q3KQV9 507 aa15.25■□□□□ 0.03
C9orf3-211ENST00000463372 LONRF3Q496Y0 759 aa15.25■□□□□ 0.03
C9orf3-211ENST00000463372 METTL13Q8N6R0 699 aa15.25■□□□□ 0.03
C9orf3-211ENST00000463372 ITFG1Q8TB96 612 aa15.25■□□□□ 0.03
C9orf3-211ENST00000463372 LPPQ93052 612 aa15.25■□□□□ 0.03
C9orf3-211ENST00000463372 FAM193BQ96PV7 902 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-211ENST00000463372 PLA2G2FQ9BZM2 168 aa15.25■□□□□ 0.03
C9orf3-211ENST00000463372 JPH1Q9HDC5 661 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-211ENST00000463372 POLIQ9UNA4 740 aa15.25■□□□□ 0.03
C9orf3-211ENST00000463372 COL1A2P08123 1366 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 FOXP2O15409 715 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 HBP1O60381 514 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 CAVIN2O95810 425 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 EIF4BP23588 611 aaKnown RBP15.24■□□□□ 0.03
C9orf3-211ENST00000463372 SLC26A2P50443 739 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 SIM1P81133 766 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-211ENST00000463372 CREB5Q02930 508 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 ZNF280BQ86YH2 543 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 GLYCTKQ8IVS8 523 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 URGCPQ8TCY9 931 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 ZC3H10Q96K80 434 aaKnown RBP15.24■□□□□ 0.03
C9orf3-211ENST00000463372 CLMPQ9H6B4 373 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 SLC9A2Q9UBY0 812 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 RAXQ9Y2V3 346 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 PIAS3Q9Y6X2 628 aa15.24■□□□□ 0.03
C9orf3-211ENST00000463372 COL4A2P08572 1712 aa15.23■□□□□ 0.03
C9orf3-211ENST00000463372 TEX15Q9BXT5 2789 aa15.23■□□□□ 0.03
C9orf3-211ENST00000463372 PHKA2P46019 1235 aa15.23■□□□□ 0.03
C9orf3-211ENST00000463372 NLRP11P59045 1033 aaKnown RBP15.23■□□□□ 0.03
C9orf3-211ENST00000463372 MTMR1Q13613 665 aa15.23■□□□□ 0.03
C9orf3-211ENST00000463372 CCDC178Q5BJE1 867 aa15.23■□□□□ 0.03
C9orf3-211ENST00000463372 MFSD6Q6ZSS7 791 aa15.23■□□□□ 0.03
C9orf3-211ENST00000463372 TAS1R1Q7RTX1 841 aa15.23■□□□□ 0.03
C9orf3-211ENST00000463372 HOMER1Q86YM7 354 aa15.23■□□□□ 0.03
C9orf3-211ENST00000463372 NPAS3Q8IXF0 933 aa15.23■□□□□ 0.03
C9orf3-211ENST00000463372 CHCHD4Q8N4Q1 142 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms