RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 TMEM175Q9BSA9 504 aa22.13■■□□□ 1.13
VARS-221ENST00000463184 VN1R3Q9BXE9 311 aa22.13■■□□□ 1.13
VARS-221ENST00000463184 DHX33Q9H6R0 707 aaKnown RBP22.13■■□□□ 1.13
VARS-221ENST00000463184 SFXN1Q9H9B4 322 aa22.13■■□□□ 1.13
VARS-221ENST00000463184 KCNMB3Q9NPA1 279 aa22.13■■□□□ 1.13
VARS-221ENST00000463184 VAV3Q9UKW4 847 aa22.13■■□□□ 1.13
VARS-221ENST00000463184 CNTNAP2Q9UHC6 1331 aa22.12■■□□□ 1.13
VARS-221ENST00000463184 H0Y858 1186 aa22.12■■□□□ 1.13
VARS-221ENST00000463184 RFC5P40937 340 aa22.12■■□□□ 1.13
VARS-221ENST00000463184 PPP4R3AQ6IN85 833 aa22.12■■□□□ 1.13
VARS-221ENST00000463184 TMC5Q6UXY8 1006 aa22.12■■□□□ 1.13
VARS-221ENST00000463184 GPR149Q86SP6 731 aa22.12■■□□□ 1.13
VARS-221ENST00000463184 PRPF31Q8WWY3 499 aaKnown RBP22.12■■□□□ 1.13
VARS-221ENST00000463184 PSPC1Q8WXF1 523 aaKnown RBP22.12■■□□□ 1.13
VARS-221ENST00000463184 KLHL5Q96PQ7 755 aa22.12■■□□□ 1.13
VARS-221ENST00000463184 RSAD1Q9HA92 442 aa22.12■■□□□ 1.13
VARS-221ENST00000463184 FAN1Q9Y2M0 1017 aa22.12■■□□□ 1.13
VARS-221ENST00000463184 CACNA1HO95180 2353 aa22.12■■□□□ 1.13
VARS-221ENST00000463184 CCDC194A0A1B0GVG4 234 aa22.11■■□□□ 1.13
VARS-221ENST00000463184 DDHD2O94830 711 aa22.11■■□□□ 1.13
VARS-221ENST00000463184 SRGAP2CP0DJJ0 459 aa22.11■■□□□ 1.13
VARS-221ENST00000463184 GCFC2P16383 781 aaKnown RBP22.11■■□□□ 1.13
VARS-221ENST00000463184 KLRC2P26717 231 aa22.11■■□□□ 1.13
VARS-221ENST00000463184 HOXA11P31270 313 aaPredicted RBP22.11■■□□□ 1.13
VARS-221ENST00000463184 NEK8Q86SG6 692 aa22.11■■□□□ 1.13
VARS-221ENST00000463184 C4orf19Q8IY42 314 aa22.11■■□□□ 1.13
VARS-221ENST00000463184 ACSF2Q96CM8 615 aaPredicted RBP22.11■■□□□ 1.13
VARS-221ENST00000463184 TM6SF1Q9BZW5 370 aa22.11■■□□□ 1.13
VARS-221ENST00000463184 SPDYE4A6NLX3 237 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 TBX3O15119 743 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 ASAP2O43150 1006 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 GAS2O43903 313 aaKnown RBP22.1■■□□□ 1.13
VARS-221ENST00000463184 B4GALT3O60512 393 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 LILRB3O75022 631 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 CLCN4P51793 760 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 LAMTOR4Q0VGL1 99 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 STK3Q13188 491 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 EPHA7Q15375 998 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 ASTLQ6HA08 431 aaPredicted RBP22.1■■□□□ 1.13
VARS-221ENST00000463184 OTUD6AQ7L8S5 288 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 OTOP3Q7RTS5 596 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 TMEM105Q8N8V8 129 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 ZNF579Q8NAF0 562 aaKnown RBP22.1■■□□□ 1.13
VARS-221ENST00000463184 CNNM3Q8NE01 707 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 TCP11Q8WWU5 503 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 TMEM143Q96AN5 459 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 LARP6Q9BRS8 491 aaKnown RBP22.1■■□□□ 1.13
VARS-221ENST00000463184 PHF20Q9BVI0 1012 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 SMOC2Q9H3U7 446 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 MINDY3Q9H8M7 445 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 UBN1Q9NPG3 1134 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 MRPL17Q9NRX2 175 aaKnown RBP22.1■■□□□ 1.13
VARS-221ENST00000463184 KCNJ14Q9UNX9 436 aa22.1■■□□□ 1.13
VARS-221ENST00000463184 PROB1E7EW31 1015 aa22.09■■□□□ 1.13
VARS-221ENST00000463184 EIF5BO60841 1220 aaKnown RBP22.09■■□□□ 1.13
VARS-221ENST00000463184 CNPP09543 421 aaKnown RBP22.09■■□□□ 1.13
VARS-221ENST00000463184 XBP1P17861 261 aa22.09■■□□□ 1.13
VARS-221ENST00000463184 NCLP19338 710 aaKnown RBP22.09■■□□□ 1.13
VARS-221ENST00000463184 YWHABP31946 246 aaKnown RBP22.09■■□□□ 1.13
VARS-221ENST00000463184 PCBP1Q15365 356 aaKnown RBP eCLIP22.09■■□□□ 1.131e-6■■□□□ 12.6
VARS-221ENST00000463184 UBXN11Q5T124 520 aa22.09■■□□□ 1.13
VARS-221ENST00000463184 CCDC149Q6ZUS6 474 aa22.09■■□□□ 1.13
VARS-221ENST00000463184 NAP1L4Q99733 375 aaKnown RBP22.09■■□□□ 1.13
VARS-221ENST00000463184 MFSD1Q9H3U5 465 aa22.09■■□□□ 1.13
VARS-221ENST00000463184 WRAP73Q9P2S5 460 aaPredicted RBP22.09■■□□□ 1.13
VARS-221ENST00000463184 SSX2IPQ9Y2D8 614 aa22.09■■□□□ 1.13
VARS-221ENST00000463184 NRP1O14786 923 aa22.08■■□□□ 1.13
VARS-221ENST00000463184 CCNT1O60563 726 aaKnown RBP22.08■■□□□ 1.13
VARS-221ENST00000463184 CDKL5O76039 1030 aa22.08■■□□□ 1.13
VARS-221ENST00000463184 POMCP01189 267 aa22.08■■□□□ 1.13
VARS-221ENST00000463184 SSBP05455 408 aaKnown RBP eCLIP22.08■■□□□ 1.13
VARS-221ENST00000463184 CLCN5P51795 746 aa22.08■■□□□ 1.13
VARS-221ENST00000463184 AFF1P51825 1210 aaKnown RBP22.08■■□□□ 1.13
VARS-221ENST00000463184 C15orf39Q6ZRI6 1047 aa22.08■■□□□ 1.13
VARS-221ENST00000463184 FERMT3Q86UX7 667 aa22.08■■□□□ 1.13
VARS-221ENST00000463184 RNF149Q8NC42 400 aa22.08■■□□□ 1.13
VARS-221ENST00000463184 HAS1Q92839 578 aa22.08■■□□□ 1.13
VARS-221ENST00000463184 LXNQ9BS40 222 aa22.08■■□□□ 1.13
VARS-221ENST00000463184 MARCH6O60337 910 aa22.07■■□□□ 1.12
VARS-221ENST00000463184 SOD2P04179 222 aa22.07■■□□□ 1.12
VARS-221ENST00000463184 AXLP30530 894 aa22.07■■□□□ 1.12
VARS-221ENST00000463184 EMC2Q15006 297 aa22.07■■□□□ 1.12
VARS-221ENST00000463184 ZSWIM4Q9H7M6 989 aa22.07■■□□□ 1.12
VARS-221ENST00000463184 PDRG1Q9NUG6 133 aa22.07■■□□□ 1.12
VARS-221ENST00000463184 ERLIN2O94905 339 aa22.06■■□□□ 1.12
VARS-221ENST00000463184 URODP06132 367 aa22.06■■□□□ 1.12
VARS-221ENST00000463184 ITGA4P13612 1032 aa22.06■■□□□ 1.12
VARS-221ENST00000463184 TDGQ13569 410 aa22.06■■□□□ 1.12
VARS-221ENST00000463184 XKR9Q5GH70 373 aa22.06■■□□□ 1.12
VARS-221ENST00000463184 PIK3AP1Q6ZUJ8 805 aa22.06■■□□□ 1.12
VARS-221ENST00000463184 SMG8Q8ND04 991 aaKnown RBP22.06■■□□□ 1.12
VARS-221ENST00000463184 CMASQ8NFW8 434 aaPredicted RBP22.06■■□□□ 1.12
VARS-221ENST00000463184 FEZF2Q8TBJ5 459 aa22.06■■□□□ 1.12
VARS-221ENST00000463184 MTRQ99707 1265 aa22.06■■□□□ 1.12
VARS-221ENST00000463184 RGL1Q9NZL6 768 aa22.06■■□□□ 1.12
VARS-221ENST00000463184 DPP7Q9UHL4 492 aa22.06■■□□□ 1.12
VARS-221ENST00000463184 INPPL1O15357 1258 aa22.05■■□□□ 1.12
VARS-221ENST00000463184 BAG4O95429 457 aaKnown RBP22.05■■□□□ 1.12
VARS-221ENST00000463184 NBL1P41271 181 aa22.05■■□□□ 1.12
VARS-221ENST00000463184 NCBP1Q09161 790 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms