RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 GUCY2CP25092 1073 aa20.82■□□□□ 0.92
COL9A3-203ENST00000462700 SLC39A14Q15043 492 aa20.82■□□□□ 0.92
COL9A3-203ENST00000462700 KARSQ15046 597 aaKnown RBP20.82■□□□□ 0.92
COL9A3-203ENST00000462700 FAM187BQ17R55 369 aa20.82■□□□□ 0.92
COL9A3-203ENST00000462700 COLGALT1Q8NBJ5 622 aa20.82■□□□□ 0.92
COL9A3-203ENST00000462700 DRC1Q96MC2 740 aa20.82■□□□□ 0.92
COL9A3-203ENST00000462700 KIFC3Q9BVG8 833 aa20.82■□□□□ 0.92
COL9A3-203ENST00000462700 TIPINQ9BVW5 301 aa20.82■□□□□ 0.92
COL9A3-203ENST00000462700 EIF2AQ9BY44 585 aaKnown RBP20.82■□□□□ 0.92
COL9A3-203ENST00000462700 CCDC113Q9H0I3 377 aa20.82■□□□□ 0.92
COL9A3-203ENST00000462700 ALG13Q9NP73 1137 aaKnown RBP20.82■□□□□ 0.92
COL9A3-203ENST00000462700 PCDHB12Q9Y5F1 795 aa20.82■□□□□ 0.92
COL9A3-203ENST00000462700 CNTNAP2Q9UHC6 1331 aa20.81■□□□□ 0.92
COL9A3-203ENST00000462700 ZSCAN22P10073 491 aaPredicted RBP20.81■□□□□ 0.92
COL9A3-203ENST00000462700 NCLP19338 710 aaKnown RBP20.81■□□□□ 0.92
COL9A3-203ENST00000462700 NASPP49321 788 aaPredicted RBP20.81■□□□□ 0.92
COL9A3-203ENST00000462700 MAPK7Q13164 816 aa20.81■□□□□ 0.92
COL9A3-203ENST00000462700 SKIV2LQ15477 1246 aaKnown RBP20.81■□□□□ 0.92
COL9A3-203ENST00000462700 TIGD5Q53EQ6 642 aa20.81■□□□□ 0.92
COL9A3-203ENST00000462700 FOXD4L5Q5VV16 416 aaPredicted RBP20.81■□□□□ 0.92
COL9A3-203ENST00000462700 GLB1LQ6UWU2 654 aa20.81■□□□□ 0.92
COL9A3-203ENST00000462700 AGMOQ6ZNB7 445 aa20.81■□□□□ 0.92
COL9A3-203ENST00000462700 SMG8Q8ND04 991 aaKnown RBP20.81■□□□□ 0.92
COL9A3-203ENST00000462700 CNNM3Q8NE01 707 aa20.81■□□□□ 0.92
COL9A3-203ENST00000462700 LRRC15Q8TF66 581 aa20.81■□□□□ 0.92
COL9A3-203ENST00000462700 FOXD4L4Q8WXT5 416 aaPredicted RBP20.81■□□□□ 0.92
COL9A3-203ENST00000462700 CCSER1Q9C0I3 900 aa20.81■□□□□ 0.92
COL9A3-203ENST00000462700 KCND2Q9NZV8 630 aa20.81■□□□□ 0.92
COL9A3-203ENST00000462700 IPPQ9Y573 584 aa20.81■□□□□ 0.92
COL9A3-203ENST00000462700 UNC80Q8N2C7 3258 aa20.81■□□□□ 0.92
COL9A3-203ENST00000462700 A0A1B0GUA9 196 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 OFD1O75665 1012 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 F13A1P00488 732 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 PRKCBP05771 671 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 PLCG1P19174 1290 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 PEX3P56589 373 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 MAPK6Q16659 721 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 CSPP1Q1MSJ5 1256 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 NOMO2Q5JPE7 1267 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 SPECC1Q5M775 1068 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 SLC27A1Q6PCB7 646 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 USP49Q70CQ1 688 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 CDR2LQ86X02 465 aaPredicted RBP20.8■□□□□ 0.92
COL9A3-203ENST00000462700 RASSF8Q8NHQ8 419 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 SPPL3Q8TCT6 385 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 EPSTI1Q96J88 318 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 CLIC6Q96NY7 704 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 RSAD1Q9HA92 442 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 BLOC1S4Q9NUP1 217 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 THEGQ9P2T0 379 aa20.8■□□□□ 0.92
COL9A3-203ENST00000462700 TTLL13PA6NNM8 815 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 ACKR2O00590 384 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 DNAJB1P25685 340 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 NPTX2P47972 431 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 EFNA5P52803 228 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 RAD51AP2Q09MP3 1159 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 DMP1Q13316 513 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-203ENST00000462700 PRPF4BQ13523 1007 aaKnown RBP20.79■□□□□ 0.92
COL9A3-203ENST00000462700 PKP1Q13835 747 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 CAMK1Q14012 370 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 THNSL1Q8IYQ7 743 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 LINC00301Q8NCQ3 95 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 SYMPKQ92797 1274 aaKnown RBP20.79■□□□□ 0.92
COL9A3-203ENST00000462700 ZNF396Q96N95 335 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-203ENST00000462700 ZNF558Q96NG5 402 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 TRIM6Q9C030 488 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-203ENST00000462700 NSUN3Q9H649 340 aaKnown RBP20.79■□□□□ 0.92
COL9A3-203ENST00000462700 C17orf75Q9HAS0 396 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 INPP5FQ9Y2H2 1132 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 MYO9BQ13459 2157 aa20.79■□□□□ 0.92
COL9A3-203ENST00000462700 CCDC169A6NNP5 214 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 FGF18O76093 207 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 NPTXRO95502 500 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 EDN1P05305 212 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 ITGA4P13612 1032 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 LIG1P18858 919 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 PBX3P40426 434 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 STK38Q15208 465 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 ARSHQ5FYA8 562 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 KCNT2Q6UVM3 1135 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 KRI1Q8N9T8 703 aaKnown RBP20.78■□□□□ 0.92
COL9A3-203ENST00000462700 POF1BQ8WVV4 589 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 RAD54LQ92698 747 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 NXF3Q9H4D5 531 aaKnown RBP20.78■□□□□ 0.92
COL9A3-203ENST00000462700 UBN1Q9NPG3 1134 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 TBC1D13Q9NVG8 400 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 HES2Q9Y543 173 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 PRRC2BQ5JSZ5 2229 aaKnown RBP20.78■□□□□ 0.92
COL9A3-203ENST00000462700 PHLPP2Q6ZVD8 1323 aa20.78■□□□□ 0.92
COL9A3-203ENST00000462700 SFI1A8K8P3 1242 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 N4BP3O15049 544 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 CSPG5O95196 566 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 UBE3AQ05086 875 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 MCM6Q14566 821 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 TCEAL5Q5H9L2 206 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 GPBP1Q86WP2 473 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 URGCPQ8TCY9 931 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 RNF39Q9H2S5 420 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 PDZD7Q9H5P4 517 aa20.77■□□□□ 0.92
COL9A3-203ENST00000462700 KMT5AQ9NQR1 393 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms