RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 TFE3P19532 575 aaPredicted RBP6.47□□□□□ -1.37
SPTA1-202ENST00000461624 GUCY1A2P33402 732 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 GDNFP39905 211 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 NBL1P41271 181 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 RBM25P49756 843 aaKnown RBP6.47□□□□□ -1.37
SPTA1-202ENST00000461624 USP14P54578 494 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 VCPP55072 806 aaKnown RBP6.47□□□□□ -1.37
SPTA1-202ENST00000461624 ETF1P62495 437 aaKnown RBP6.47□□□□□ -1.37
SPTA1-202ENST00000461624 PTPN11Q06124 597 aaPredicted RBP6.47□□□□□ -1.37
SPTA1-202ENST00000461624 CAMK2GQ13555 558 aaPredicted RBP6.47□□□□□ -1.37
SPTA1-202ENST00000461624 SEPT6Q14141 434 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 MLANAQ16655 118 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 ATP2B3Q16720 1220 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 KIAA1755Q5JYT7 1200 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 WIPI1Q5MNZ9 446 aaPredicted RBP6.47□□□□□ -1.37
SPTA1-202ENST00000461624 SPOCD1Q6ZMY3 1216 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 TEX11Q8IYF3 940 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 PCSK9Q8NBP7 692 aaKnown RBP6.47□□□□□ -1.37
SPTA1-202ENST00000461624 PHOSPHO2Q8TCD6 241 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 SH3RF3Q8TEJ3 882 aaPredicted RBP6.47□□□□□ -1.37
SPTA1-202ENST00000461624 HSPA12BQ96MM6 686 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 TRPV6Q9H1D0 765 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 GNL3LQ9NVN8 582 aaKnown RBP6.47□□□□□ -1.37
SPTA1-202ENST00000461624 KBTBD4Q9NVX7 518 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 TLR6Q9Y2C9 796 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 PCDHB5Q9Y5E4 795 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 ASTN1O14525 1302 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 FLT1P17948 1338 aa6.47□□□□□ -1.37
SPTA1-202ENST00000461624 SMG1Q96Q15 3661 aaKnown RBP6.46□□□□□ -1.37
SPTA1-202ENST00000461624 SCN10AQ9Y5Y9 1956 aa6.46□□□□□ -1.37
SPTA1-202ENST00000461624 A0A1W2PRG0 241 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 MINDY4BA8MYZ0 360 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 VAMP4O75379 141 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 TSPAN15O95858 294 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 PF4P02776 101 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 FCER1AP12319 257 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 CYP7A1P22680 504 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 LTBRP36941 435 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 KIR3DL1P43629 444 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 ERVK-21P61565 698 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 COG2Q14746 738 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 SMAD2Q15796 467 aaKnown RBP6.46□□□□□ -1.38
SPTA1-202ENST00000461624 NKG7Q16617 165 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 FBLN7Q53RD9 439 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 SPTY2D1Q68D10 685 aaPredicted RBP6.46□□□□□ -1.38
SPTA1-202ENST00000461624 LETMD1Q6P1Q0 360 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 MAMDC4Q6UXC1 1216 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 FOXP4Q8IVH2 680 aaPredicted RBP6.46□□□□□ -1.38
SPTA1-202ENST00000461624 RPUSD2Q8IZ73 545 aaKnown RBP6.46□□□□□ -1.38
SPTA1-202ENST00000461624 MSL3Q8N5Y2 521 aaKnown RBP6.46□□□□□ -1.38
SPTA1-202ENST00000461624 MB21D1Q8N884 522 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 KIRREL1Q96J84 757 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 FGD4Q96M96 766 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 FEZ1Q99689 392 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 FSD1Q9BTV5 496 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 KATNBL1Q9H079 304 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 ATP13A1Q9HD20 1204 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 ABCF2Q9UG63 623 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 ADAMTS5Q9UNA0 930 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 MYO5AQ9Y4I1 1855 aaKnown RBP6.46□□□□□ -1.38
SPTA1-202ENST00000461624 ST14Q9Y5Y6 855 aa6.46□□□□□ -1.38
SPTA1-202ENST00000461624 DNAJC25-GNG10A0A024R161 153 aa6.45□□□□□ -1.38
SPTA1-202ENST00000461624 CST3P01034 146 aaPredicted RBP6.45□□□□□ -1.38
SPTA1-202ENST00000461624 C6orf222P0C671 652 aaPredicted RBP6.45□□□□□ -1.38
SPTA1-202ENST00000461624 FANCCQ00597 558 aa6.45□□□□□ -1.38
SPTA1-202ENST00000461624 RPL6Q02878 288 aaKnown RBP6.45□□□□□ -1.38
SPTA1-202ENST00000461624 TMEM132BQ14DG7 1078 aa6.45□□□□□ -1.38
SPTA1-202ENST00000461624 RALBP1Q15311 655 aa6.45□□□□□ -1.38
SPTA1-202ENST00000461624 FYB2Q5VWT5 728 aa6.45□□□□□ -1.38
SPTA1-202ENST00000461624 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.45□□□□□ -1.38
SPTA1-202ENST00000461624 ATOH1Q92858 354 aaPredicted RBP6.45□□□□□ -1.38
SPTA1-202ENST00000461624 ATG4CQ96DT6 458 aa6.45□□□□□ -1.38
SPTA1-202ENST00000461624 PABPC5Q96DU9 382 aaKnown RBP6.45□□□□□ -1.38
SPTA1-202ENST00000461624 LIN37Q96GY3 246 aaPredicted RBP6.45□□□□□ -1.38
SPTA1-202ENST00000461624 RHOVQ96L33 236 aa6.45□□□□□ -1.38
SPTA1-202ENST00000461624 UPF3BQ9BZI7 483 aaKnown RBP6.45□□□□□ -1.38
SPTA1-202ENST00000461624 HOXC10Q9NYD6 342 aa6.45□□□□□ -1.38
SPTA1-202ENST00000461624 KIAA1522Q9P206 1035 aaPredicted RBP6.45□□□□□ -1.38
SPTA1-202ENST00000461624 FAM184BQ9ULE4 1060 aa6.45□□□□□ -1.38
SPTA1-202ENST00000461624 PALD1Q9ULE6 856 aa6.45□□□□□ -1.38
SPTA1-202ENST00000461624 CNPY2Q9Y2B0 182 aa6.45□□□□□ -1.38
SPTA1-202ENST00000461624 SUPT16HQ9Y5B9 1047 aaKnown RBP6.45□□□□□ -1.38
SPTA1-202ENST00000461624 CNOT1A5YKK6 2376 aaKnown RBP6.45□□□□□ -1.38
SPTA1-202ENST00000461624 TNKSO95271 1327 aa6.45□□□□□ -1.38
SPTA1-202ENST00000461624 DMXL2Q8TDJ6 3036 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 LOC400499M0QZD8 3231 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 TRIP12Q14669 1992 aaPredicted RBP6.44□□□□□ -1.38
SPTA1-202ENST00000461624 H3BS24 57 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 CIAO1O76071 339 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 SHMT1P34896 483 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 EIF4A3P38919 411 aaKnown RBP6.44□□□□□ -1.38
SPTA1-202ENST00000461624 RAP1GAPP47736 663 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 PDE4BQ07343 736 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 ITGA7Q13683 1181 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 CCDC144BQ3MJ40 725 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 CDKAL1Q5VV42 579 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 PRAMEF13Q5VWM6 474 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 CXCL17Q6UXB2 119 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 ADGRA1Q86SQ6 560 aa6.44□□□□□ -1.38
SPTA1-202ENST00000461624 RIOX2Q8IUF8 465 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms