RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 IGFL4Q6B9Z1 124 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 DPP8Q6V1X1 898 aaPredicted RBP4.56□□□□□ -1.68
RFC4-211ENST00000460408 BMP8AQ7Z5Y6 402 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 ZNF575Q86XF7 245 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 OR5AN1Q8NGI8 311 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 TSPEARQ8WU66 669 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 RPGRQ92834 1020 aaKnown RBP4.56□□□□□ -1.68
RFC4-211ENST00000460408 EDAQ92838 391 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 RAX2Q96IS3 184 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 LMF1Q96S06 567 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 QRSL1Q9H0R6 528 aaKnown RBP4.56□□□□□ -1.68
RFC4-211ENST00000460408 DNAJC28Q9NX36 388 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 MKS1Q9NXB0 559 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 ZIM2Q9NZV7 527 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 KCMF1Q9P0J7 381 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 CHPF2Q9P2E5 772 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 EDARQ9UNE0 448 aa4.56□□□□□ -1.68
RFC4-211ENST00000460408 ZFR2Q9UPR6 939 aaKnown RBP4.56□□□□□ -1.68
RFC4-211ENST00000460408 A0A0A6YYK5 440 aaPredicted RBP4.55□□□□□ -1.68
RFC4-211ENST00000460408 ST20-MTHFSA0A0A6YYL1 179 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 TSPAN6O43657 245 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 SEC24DO94855 1032 aaPredicted RBP4.55□□□□□ -1.68
RFC4-211ENST00000460408 PCDH8O95206 1070 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 ZRANB2O95218 330 aaKnown RBP eCLIP4.55□□□□□ -1.68
RFC4-211ENST00000460408 SCGB1D2O95969 90 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 TGM1P22735 817 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 CSF2RBP32927 897 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 RECQLP46063 649 aaPredicted RBP4.55□□□□□ -1.68
RFC4-211ENST00000460408 GPR15P49685 360 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 ANTXR2P58335 489 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 DPTQ07507 201 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 MUM1Q2TAK8 710 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 GRAMD4Q6IC98 578 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 FMNL3Q8IVF7 1028 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 AMOTL1Q8IY63 956 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 CMTR2Q8IYT2 770 aaKnown RBP4.55□□□□□ -1.68
RFC4-211ENST00000460408 CPA6Q8N4T0 437 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 CDYL2Q8N8U2 506 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 PPP1R14CQ8TAE6 165 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 RSAD2Q8WXG1 361 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 AUTS2Q8WXX7 1259 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 SSH1Q8WYL5 1049 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 JADE3Q92613 823 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 TSR2Q969E8 191 aaKnown RBP4.55□□□□□ -1.68
RFC4-211ENST00000460408 ADOQ96SZ5 270 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 FDXACB1Q9BRP7 624 aaPredicted RBP4.55□□□□□ -1.68
RFC4-211ENST00000460408 SOX7Q9BT81 388 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 AASDHPPTQ9NRN7 309 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.55□□□□□ -1.68
RFC4-211ENST00000460408 LUC7L2Q9Y383 392 aaKnown RBP4.55□□□□□ -1.68
RFC4-211ENST00000460408 PCDHB6Q9Y5E3 794 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 GPR45Q9Y5Y3 372 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 CDY2AQ9Y6F7 541 aa4.55□□□□□ -1.68
RFC4-211ENST00000460408 KLHL33A6NCF5 533 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 H0Y858 1186 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 NARSO43776 548 aaKnown RBP4.54□□□□□ -1.68
RFC4-211ENST00000460408 CUTAO60888 179 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 RFPL1O75677 317 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 ZNF202O95125 648 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 OSMP13725 252 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 MTHFD2P13995 350 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 ADCY8P40145 1251 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 LGALS4P56470 323 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 TOP3AQ13472 1001 aaPredicted RBP4.54□□□□□ -1.68
RFC4-211ENST00000460408 PPP2R5AQ15172 486 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 NRN1LQ496H8 165 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 USP39Q53GS9 565 aaKnown RBP4.54□□□□□ -1.68
RFC4-211ENST00000460408 CCDC178Q5BJE1 867 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 AGBL4Q5VU57 503 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 OR14C36Q8NHC7 312 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 TEKT5Q96M29 485 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 DPP7Q9UHL4 492 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 TCEAL9Q9UHQ7 104 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 EVLQ9UI08 416 aaPredicted RBP4.54□□□□□ -1.68
RFC4-211ENST00000460408 TUBD1Q9UJT1 453 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 FBXO10Q9UK96 956 aa4.54□□□□□ -1.68
RFC4-211ENST00000460408 A0A0G2JNJ9 132 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 PLSCR1O15162 318 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 XPOTO43592 962 aaKnown RBP4.53□□□□□ -1.68
RFC4-211ENST00000460408 SNUPNO95149 360 aaKnown RBP4.53□□□□□ -1.68
RFC4-211ENST00000460408 ZSCAN20P17040 1043 aaPredicted RBP4.53□□□□□ -1.68
RFC4-211ENST00000460408 C5AR1P21730 350 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 COMTP21964 271 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 POLD1P28340 1107 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 PTH1RQ03431 593 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 PPARAQ07869 468 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 MAP3K12Q12852 859 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 SPIDRQ14159 915 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 EIF4HQ15056 248 aaKnown RBP4.53□□□□□ -1.68
RFC4-211ENST00000460408 DGKDQ16760 1214 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 ANO4Q32M45 955 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 WDR72Q3MJ13 1102 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 TRIM68Q6AZZ1 485 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 NXNQ6DKJ4 435 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 GAREM2Q75VX8 874 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 PNMA8AQ86V59 439 aaPredicted RBP4.53□□□□□ -1.68
RFC4-211ENST00000460408 TAX1BP1Q86VP1 789 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 REXO1L1PQ8IX06 675 aa4.53□□□□□ -1.68
RFC4-211ENST00000460408 GIMAP8Q8ND71 665 aaPredicted RBP4.53□□□□□ -1.68
RFC4-211ENST00000460408 GAB3Q8WWW8 586 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms