RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 CNNM4Q6P4Q7 775 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 NFRKBQ6P4R8 1299 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 CCDC43Q96MW1 224 aaKnown RBP17.13■□□□□ 0.33
CMTM3-203ENST00000460097 RBM12Q9NTZ6 932 aaKnown RBP17.13■□□□□ 0.33
CMTM3-203ENST00000460097 BHMG1C9JSJ3 638 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-203ENST00000460097 CLGNO14967 610 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 ADAMTS3O15072 1205 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 SGPL1O95470 568 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 GJA8P48165 433 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 MAN2A1Q16706 1144 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 LACTB2Q53H82 288 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-203ENST00000460097 LHX8Q68G74 356 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 ANKRD40Q6AI12 368 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 XRRA1Q6P2D8 792 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 IL31RAQ8NI17 732 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 ANO3Q9BYT9 981 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 TRIM9Q9C026 710 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 MLXIPQ9HAP2 919 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 TMBIM4Q9HC24 238 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 PDGFCQ9NRA1 345 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 BTNL10A8MVZ5 291 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 AKR1B10O60218 316 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 EIF4A3P38919 411 aaKnown RBP17.12■□□□□ 0.33
CMTM3-203ENST00000460097 CUL1Q13616 776 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 PCNX4Q63HM2 1172 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 CCDC13Q8IYE1 715 aa17.12■□□□□ 0.33
CMTM3-203ENST00000460097 U2AF1L4Q8WU68 220 aaKnown RBP17.12■□□□□ 0.33
CMTM3-203ENST00000460097 PCMTD1Q96MG8 357 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-203ENST00000460097 ATP8B3O60423 1300 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 RBM47A0AV96 593 aaKnown RBP17.11■□□□□ 0.33
CMTM3-203ENST00000460097 MYO1FO00160 1098 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 STAM2O75886 525 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 HEXIM1O94992 359 aaKnown RBP17.11■□□□□ 0.33
CMTM3-203ENST00000460097 RARBP10826 455 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 ADCYAP1R1P41586 468 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 MRPS9P82933 396 aaKnown RBP17.11■□□□□ 0.33
CMTM3-203ENST00000460097 SLC7A5Q01650 507 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 TNFAIP2Q03169 654 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 SEPT14Q6ZU15 432 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 RASGRP4Q8TDF6 673 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 BAP1Q92560 729 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 WDR11Q9BZH6 1224 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 NDST4Q9H3R1 872 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 TMEM59LQ9UK28 342 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 PCDHGC5Q9Y5F6 944 aa17.11■□□□□ 0.33
CMTM3-203ENST00000460097 POTEFA5A3E0 1075 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 KRT14P02533 472 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 GLI1P08151 1106 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 CARSP49589 748 aaKnown RBP17.1■□□□□ 0.33
CMTM3-203ENST00000460097 KLK7P49862 253 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 TNNC1P63316 161 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 SKIDA1Q1XH10 827 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 SPDYCQ5MJ68 293 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 AGBL2Q5U5Z8 902 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 PDXDC1Q6P996 788 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 RUFY4Q6ZNE9 571 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 GIMAP7Q8NHV1 300 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 SCFD2Q8WU76 684 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 LRRC45Q96CN5 670 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 ISCUQ9H1K1 167 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 KIAA0100Q14667 2235 aaKnown RBP17.1■□□□□ 0.33
CMTM3-203ENST00000460097 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-203ENST00000460097 PVALEFA0A1B0GWK0 134 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 GOLGA6L10A6NI86 522 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 DUSP11O75319 330 aaKnown RBP17.1■□□□□ 0.33
CMTM3-203ENST00000460097 GHRP10912 638 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 SREBF1P36956 1147 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 CDR1P51861 262 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 LRRC63Q05C16 580 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 TTLL4Q14679 1199 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 SH2D3CQ8N5H7 860 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 INPP4AQ96PE3 977 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-203ENST00000460097 CRISPLD2Q9H0B8 497 aa17.1■□□□□ 0.33
CMTM3-203ENST00000460097 RGS20O76081 388 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 SMPD1P17405 629 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 EN2P19622 333 aaPredicted RBP17.09■□□□□ 0.33
CMTM3-203ENST00000460097 ELF1P32519 619 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 SOX10P56693 466 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 NAB2Q15742 525 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 GNPTABQ3T906 1256 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 CCDC121Q6ZUS5 278 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 CYFIP2Q96F07 1278 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 CALR3Q96L12 384 aaKnown RBP17.09■□□□□ 0.33
CMTM3-203ENST00000460097 JPH2Q9BR39 696 aaPredicted RBP17.09■□□□□ 0.33
CMTM3-203ENST00000460097 EPB41L5Q9HCM4 733 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 SLC40A1Q9NP59 571 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 XPNPEP3Q9NQH7 507 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 SLC12A6Q9UHW9 1150 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 OGDHLQ9ULD0 1010 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 NFU1Q9UMS0 254 aa17.09■□□□□ 0.33
CMTM3-203ENST00000460097 GMNCA6NCL1 334 aa17.08■□□□□ 0.33
CMTM3-203ENST00000460097 TRAPPC3O43617 180 aa17.08■□□□□ 0.33
CMTM3-203ENST00000460097 PLEKP08567 350 aaPredicted RBP17.08■□□□□ 0.33
CMTM3-203ENST00000460097 TXNP10599 105 aaKnown RBP17.08■□□□□ 0.33
CMTM3-203ENST00000460097 ATP1A2P50993 1020 aa17.08■□□□□ 0.33
CMTM3-203ENST00000460097 ARHGAP4P98171 946 aa17.08■□□□□ 0.33
CMTM3-203ENST00000460097 GUCY1A3Q02108 690 aa17.08■□□□□ 0.33
CMTM3-203ENST00000460097 MTMR3Q13615 1198 aa17.08■□□□□ 0.33
CMTM3-203ENST00000460097 DUSP28Q4G0W2 176 aa17.08■□□□□ 0.33
CMTM3-203ENST00000460097 CEP85LQ5SZL2 805 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms