RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 KRBA2Q6ZNG9 492 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 SLC24A5Q71RS6 500 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 HERC6Q8IVU3 1022 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 CCDC65Q8IXS2 484 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 RNF169Q8NCN4 708 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 CNNM3Q8NE01 707 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 LINC01599Q8WXQ3 324 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 DNAJC19Q96DA6 116 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 PAGE5Q96GU1 130 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 CPB2Q96IY4 423 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 GBP4Q96PP9 640 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 C7orf25Q9BPX7 421 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 CCDC113Q9H0I3 377 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 FZD8Q9H461 694 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 C1orf112Q9NSG2 853 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 AGPAT5Q9NUQ2 364 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 PRMT7Q9NVM4 692 aaPredicted RBP11.96□□□□□ -0.49
CCDC12-204ENST00000460035 DACT1Q9NYF0 836 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 TBC1D7Q9P0N9 293 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 ARHGAP28Q9P2N2 729 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 USP20Q9Y2K6 914 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 PHLPP2Q6ZVD8 1323 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 FRMD3A2A2Y4 597 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 H0YCG3 227 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 K7ENM7 598 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 ACKR2O00590 384 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 B4GALT5O43286 388 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 STAG3L1P0CL83 205 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 ARF4P18085 180 aaPredicted RBP11.95□□□□□ -0.5
CCDC12-204ENST00000460035 SCP2P22307 547 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 CASP1P29466 404 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 NMT1P30419 496 aaKnown RBP11.95□□□□□ -0.5
CCDC12-204ENST00000460035 AXLP30530 894 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 HOXA11P31270 313 aaPredicted RBP11.95□□□□□ -0.5
CCDC12-204ENST00000460035 SARSP49591 514 aaKnown RBP11.95□□□□□ -0.5
CCDC12-204ENST00000460035 AMHR2Q16671 573 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 LRIT3Q3SXY7 679 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 HABP4Q5JVS0 413 aaKnown RBP11.95□□□□□ -0.5
CCDC12-204ENST00000460035 HAUS6Q7Z4H7 955 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 CDR2LQ86X02 465 aaPredicted RBP11.95□□□□□ -0.5
CCDC12-204ENST00000460035 SFR1Q86XK3 245 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 FAM178BQ8IXR5 827 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 TOP1MTQ969P6 601 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 CCDC34Q96HJ3 373 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 PRIMPOLQ96LW4 560 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 TRAIPQ9BWF2 469 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 TRIM9Q9C026 710 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 TMEM134Q9H6X4 195 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 MRPL44Q9H9J2 332 aaKnown RBP11.95□□□□□ -0.5
CCDC12-204ENST00000460035 RNF216Q9NWF9 866 aaPredicted RBP11.95□□□□□ -0.5
CCDC12-204ENST00000460035 MSRAQ9UJ68 235 aa11.95□□□□□ -0.5
CCDC12-204ENST00000460035 CNTNAP2Q9UHC6 1331 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 C9IYK1 514 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
CCDC12-204ENST00000460035 TLL1O43897 1013 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 MAPTP10636 758 aaKnown RBP11.94□□□□□ -0.5
CCDC12-204ENST00000460035 NCKAP1LP55160 1127 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 UBE2HP62256 183 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 FAM189BP81408 668 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 FAM160A1Q05DH4 1040 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 CUL4BQ13620 913 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 KANK3Q6NY19 840 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 NOTUMQ6P988 496 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 ECHDC2Q86YB7 292 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 NPAS4Q8IUM7 802 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 FMR1NBQ8N0W7 255 aaPredicted RBP11.94□□□□□ -0.5
CCDC12-204ENST00000460035 CRIPAKQ8N1N5 446 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 SLC17A8Q8NDX2 589 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 TMEM161BQ8NDZ6 487 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 ENGASEQ8NFI3 743 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 CCDC51Q96ER9 411 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 TCHPQ9BT92 498 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 TRIM6Q9C030 488 aaPredicted RBP11.94□□□□□ -0.5
CCDC12-204ENST00000460035 SEL1LQ9UBV2 794 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 PCDHB2Q9Y5E7 798 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 ATG2AQ2TAZ0 1938 aa11.94□□□□□ -0.5
CCDC12-204ENST00000460035 MYO7AQ13402 2215 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 A0A0U1RQF3 1178 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 A0A1B0GUA9 196 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 TTLL13PA6NNM8 815 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 GJB5O95377 273 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 NPTXRO95502 500 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 MYL1P05976 194 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 SKIP12755 728 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 MYOGP15173 224 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 PBX2P40425 430 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 RAB27AP51159 221 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 SMAD3P84022 425 aaKnown RBP11.93□□□□□ -0.5
CCDC12-204ENST00000460035 COASYQ13057 564 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 SNW1Q13573 536 aaKnown RBP11.93□□□□□ -0.5
CCDC12-204ENST00000460035 RAB30Q15771 203 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 ZC2HC1CQ53FD0 456 aaPredicted RBP11.93□□□□□ -0.5
CCDC12-204ENST00000460035 NT5DC1Q5TFE4 455 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 ZNF720Q7Z2F6 126 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 BICD1Q96G01 975 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 FIZ1Q96SL8 496 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 YME1L1Q96TA2 773 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 RAD9AQ99638 391 aa11.93□□□□□ -0.5
CCDC12-204ENST00000460035 TARS2Q9BW92 718 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms