RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 COASYQ13057 564 aa23.21■■□□□ 1.31
SRM-202ENST00000459997 NBR1Q14596 966 aa23.21■■□□□ 1.31
SRM-202ENST00000459997 POTEGQ6S5H5 508 aa23.21■■□□□ 1.31
SRM-202ENST00000459997 AGMOQ6ZNB7 445 aa23.21■■□□□ 1.31
SRM-202ENST00000459997 MRPL10Q7Z7H8 261 aaKnown RBP23.21■■□□□ 1.31
SRM-202ENST00000459997 IFNLR1Q8IU57 520 aaPredicted RBP23.21■■□□□ 1.31
SRM-202ENST00000459997 VN1R2Q8NFZ6 395 aa23.21■■□□□ 1.31
SRM-202ENST00000459997 URGCPQ8TCY9 931 aa23.21■■□□□ 1.31
SRM-202ENST00000459997 TMEM169Q96HH4 297 aa23.21■■□□□ 1.31
SRM-202ENST00000459997 DBR1Q9UK59 544 aaKnown RBP23.21■■□□□ 1.31
SRM-202ENST00000459997 HIDE1A8MVS5 230 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 EYA4O95677 639 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 U2AF2P26368 475 aaKnown RBP eCLIP23.2■■□□□ 1.3
SRM-202ENST00000459997 AXLP30530 894 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 MBTD1Q05BQ5 628 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 NCBP1Q09161 790 aaKnown RBP23.2■■□□□ 1.3
SRM-202ENST00000459997 NOTUMQ6P988 496 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 MAEAQ7L5Y9 396 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 SMRP1Q8NCR6 262 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 CPB2Q96IY4 423 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 NACC1Q96RE7 527 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 GBP3Q9H0R5 595 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 NRDE2Q9H7Z3 1164 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 RSAD1Q9HA92 442 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 C5orf42Q9H799 3197 aa23.2■■□□□ 1.3
SRM-202ENST00000459997 CNTNAP2Q9UHC6 1331 aa23.19■■□□□ 1.3
SRM-202ENST00000459997 NCLP19338 710 aaKnown RBP23.19■■□□□ 1.3
SRM-202ENST00000459997 RPA1P27694 616 aa23.19■■□□□ 1.3
SRM-202ENST00000459997 SMC1AQ14683 1233 aaKnown RBP23.19■■□□□ 1.3
SRM-202ENST00000459997 TMEM173Q86WV6 379 aaPredicted RBP23.19■■□□□ 1.3
SRM-202ENST00000459997 MCPH1Q8NEM0 835 aa23.19■■□□□ 1.3
SRM-202ENST00000459997 EIF2AQ9BY44 585 aaKnown RBP23.19■■□□□ 1.3
SRM-202ENST00000459997 NFKBIZQ9BYH8 718 aa23.19■■□□□ 1.3
SRM-202ENST00000459997 GPRC5CQ9NQ84 441 aa23.19■■□□□ 1.3
SRM-202ENST00000459997 DNAJB4Q9UDY4 337 aa23.19■■□□□ 1.3
SRM-202ENST00000459997 KIF3AQ9Y496 699 aa23.19■■□□□ 1.3
SRM-202ENST00000459997 CARNS1A5YM72 827 aa23.18■■□□□ 1.3
SRM-202ENST00000459997 C19orf67A6NJJ6 358 aa23.18■■□□□ 1.3
SRM-202ENST00000459997 PI4K2BG5E9Z4 385 aa23.18■■□□□ 1.3
SRM-202ENST00000459997 SRGAP2BP0DMP2 458 aa23.18■■□□□ 1.3
SRM-202ENST00000459997 COL9A1P20849 921 aa23.18■■□□□ 1.3
SRM-202ENST00000459997 CA8P35219 290 aa23.18■■□□□ 1.3
SRM-202ENST00000459997 HAUS3Q68CZ6 603 aa23.18■■□□□ 1.3
SRM-202ENST00000459997 C4orf32Q8N8J7 132 aa23.18■■□□□ 1.3
SRM-202ENST00000459997 SMG8Q8ND04 991 aaKnown RBP23.18■■□□□ 1.3
SRM-202ENST00000459997 CNNM3Q8NE01 707 aa23.18■■□□□ 1.3
SRM-202ENST00000459997 CCDC51Q96ER9 411 aa23.18■■□□□ 1.3
SRM-202ENST00000459997 POP1Q99575 1024 aaKnown RBP23.18■■□□□ 1.3
SRM-202ENST00000459997 IPPQ9Y573 584 aa23.18■■□□□ 1.3
SRM-202ENST00000459997 LRRIQ4A6NIV6 560 aa23.17■■□□□ 1.3
SRM-202ENST00000459997 GALTP07902 379 aa23.17■■□□□ 1.3
SRM-202ENST00000459997 ITGA4P13612 1032 aa23.17■■□□□ 1.3
SRM-202ENST00000459997 TOB1P50616 345 aaPredicted RBP23.17■■□□□ 1.3
SRM-202ENST00000459997 FXR2P51116 673 aaKnown RBP eCLIP23.17■■□□□ 1.3
SRM-202ENST00000459997 AFF1P51825 1210 aaKnown RBP23.17■■□□□ 1.3
SRM-202ENST00000459997 AMHR2Q16671 573 aa23.17■■□□□ 1.3
SRM-202ENST00000459997 LLGL2Q6P1M3 1020 aa23.17■■□□□ 1.3
SRM-202ENST00000459997 ZNF280BQ86YH2 543 aa23.17■■□□□ 1.3
SRM-202ENST00000459997 MRPL43Q8N983 215 aaKnown RBP23.17■■□□□ 1.3
SRM-202ENST00000459997 IGSF21Q96ID5 467 aa23.17■■□□□ 1.3
SRM-202ENST00000459997 TMX3Q96JJ7 454 aa23.17■■□□□ 1.3
SRM-202ENST00000459997 CSRNP2Q9H175 543 aa23.17■■□□□ 1.3
SRM-202ENST00000459997 USP15Q9Y4E8 981 aaPredicted RBP23.17■■□□□ 1.3
SRM-202ENST00000459997 PCDHB6Q9Y5E3 794 aa23.17■■□□□ 1.3
SRM-202ENST00000459997 ARHGEF35A5YM69 484 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 C2orf71A6NGG8 1288 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 B4GALT5O43286 388 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 B4GALT3O60512 393 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 CD2BP2O95400 341 aaKnown RBP23.16■■□□□ 1.3
SRM-202ENST00000459997 POMCP01189 267 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 ARF4P18085 180 aaPredicted RBP23.16■■□□□ 1.3
SRM-202ENST00000459997 CCT6AP40227 531 aaKnown RBP23.16■■□□□ 1.3
SRM-202ENST00000459997 SLC11A1P49279 550 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 PTGDRQ13258 359 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 KCNC3Q14003 757 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 BMS1Q14692 1282 aaKnown RBP23.16■■□□□ 1.3
SRM-202ENST00000459997 PADI6Q6TGC4 694 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 VPS52Q8N1B4 723 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 BCL7CQ8WUZ0 217 aaPredicted RBP23.16■■□□□ 1.3
SRM-202ENST00000459997 FAM193BQ96PV7 902 aaPredicted RBP23.16■■□□□ 1.3
SRM-202ENST00000459997 UBN1Q9NPG3 1134 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 KANSL3Q9P2N6 904 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 LRWD1Q9UFC0 647 aa23.16■■□□□ 1.3
SRM-202ENST00000459997 DDHD2O94830 711 aa23.15■■□□□ 1.3
SRM-202ENST00000459997 MUTP22033 750 aa23.15■■□□□ 1.3
SRM-202ENST00000459997 TMEM31Q5JXX7 168 aa23.15■■□□□ 1.3
SRM-202ENST00000459997 MCTP1Q6DN14 999 aa23.15■■□□□ 1.3
SRM-202ENST00000459997 TMEM184AQ6ZMB5 413 aa23.15■■□□□ 1.3
SRM-202ENST00000459997 DDX53Q86TM3 631 aaKnown RBP23.15■■□□□ 1.3
SRM-202ENST00000459997 TBC1D32Q96NH3 1257 aa23.15■■□□□ 1.3
SRM-202ENST00000459997 TRIM6Q9C030 488 aaPredicted RBP23.15■■□□□ 1.3
SRM-202ENST00000459997 ZBP1Q9H171 429 aa23.15■■□□□ 1.3
SRM-202ENST00000459997 RNF39Q9H2S5 420 aa23.15■■□□□ 1.3
SRM-202ENST00000459997 HES2Q9Y543 173 aa23.15■■□□□ 1.3
SRM-202ENST00000459997 FAM86C2PA6NEL3 165 aa23.14■■□□□ 1.29
SRM-202ENST00000459997 CXCL14O95715 111 aa23.14■■□□□ 1.29
SRM-202ENST00000459997 ALADP13716 330 aa23.14■■□□□ 1.29
SRM-202ENST00000459997 ANKRD54Q6NXT1 300 aa23.14■■□□□ 1.29
SRM-202ENST00000459997 LRFN3Q9BTN0 628 aa23.14■■□□□ 1.29
SRM-202ENST00000459997 APOL6Q9BWW8 343 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms