RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 H7C1D1 291 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 RNF225M0QZC1 329 aaPredicted RBP12.21□□□□□ -0.46
DDX39B-214ENST00000458640 ACTN4O43707 911 aaKnown RBP12.21□□□□□ -0.46
DDX39B-214ENST00000458640 ATP9BO43861 1147 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 PEX11AO75192 247 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 MATR3P43243 847 aaKnown RBP eCLIP12.21□□□□□ -0.466e-9■□□□□ 9.9
DDX39B-214ENST00000458640 GUCY2FP51841 1108 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 ADCY1Q08828 1119 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 MKRN3Q13064 507 aaKnown RBP12.21□□□□□ -0.46
DDX39B-214ENST00000458640 ITGA9Q13797 1035 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 SLC44A4Q53GD3 710 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 SPDYAQ5MJ70 313 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 TATDN1Q6P1N9 297 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 TMEM179Q6ZVK1 233 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 ZFPM1Q8IX07 1006 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 STAG2Q8N3U4 1231 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 BHMTQ93088 406 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 DHRS1Q96LJ7 313 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 ELAC2Q9BQ52 826 aaKnown RBP12.21□□□□□ -0.46
DDX39B-214ENST00000458640 KANSL2Q9H9L4 492 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 NHEJ1Q9H9Q4 299 aaPredicted RBP12.21□□□□□ -0.46
DDX39B-214ENST00000458640 PICK1Q9NRD5 415 aa12.21□□□□□ -0.46
DDX39B-214ENST00000458640 ZNF70Q9UC06 446 aaPredicted RBP12.21□□□□□ -0.46
DDX39B-214ENST00000458640 hCG_1984214I3L0E3 225 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 IPO5O00410 1097 aaKnown RBP12.2□□□□□ -0.46
DDX39B-214ENST00000458640 BMP15O95972 392 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 EEF1GP26641 437 aaKnown RBP12.2□□□□□ -0.46
DDX39B-214ENST00000458640 RASSF2P50749 326 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 EIF6P56537 245 aaKnown RBP12.2□□□□□ -0.46
DDX39B-214ENST00000458640 UBXN1Q04323 297 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 SH3RF1Q7Z6J0 888 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 LRRC34Q8IZ02 419 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 NME8Q8N427 588 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 ZNF713Q8N859 430 aaPredicted RBP12.2□□□□□ -0.46
DDX39B-214ENST00000458640 MB21D1Q8N884 522 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 FAM151AQ8WW52 585 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
DDX39B-214ENST00000458640 LRMDAQ9H2I8 198 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 EPB41L1Q9H4G0 881 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 ABCF3Q9NUQ8 709 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 hCG_1642624A0A1W2PR95 340 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 TMEM247A6NEH6 219 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 POLR2DO15514 142 aaKnown RBP12.2□□□□□ -0.46
DDX39B-214ENST00000458640 HNRNPCL1O60812 293 aaKnown RBP12.2□□□□□ -0.46
DDX39B-214ENST00000458640 UNC5CO95185 931 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 POTEJP0CG39 1038 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 HNRNPH3P31942 346 aaKnown RBP12.2□□□□□ -0.46
DDX39B-214ENST00000458640 SERPINB4P48594 390 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 PTDSS1P48651 473 aaKnown RBP12.2□□□□□ -0.46
DDX39B-214ENST00000458640 TNNI2P48788 182 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 DNM2P50570 870 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 PDE1BQ01064 536 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 TMEM62Q0P6H9 643 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 ACVR2BQ13705 512 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 GPATCH4Q5T3I0 446 aaKnown RBP12.2□□□□□ -0.46
DDX39B-214ENST00000458640 RNF43Q68DV7 783 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 FAM83AQ86UY5 434 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 IQCF2Q8IXL9 164 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 LRRC47Q8N1G4 583 aaKnown RBP12.2□□□□□ -0.46
DDX39B-214ENST00000458640 KCNV2Q8TDN2 545 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 GRAMD1AQ96CP6 724 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 CLMNQ96JQ2 1002 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.2□□□□□ -0.469e-25■■■□□ 16.8
DDX39B-214ENST00000458640 PYM1Q9BRP8 204 aaKnown RBP12.2□□□□□ -0.46
DDX39B-214ENST00000458640 OCEL1Q9H607 264 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 DNAJC18Q9H819 358 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 SPON1Q9HCB6 807 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 POLD4Q9HCU8 107 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 CABP5Q9NP86 173 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 CROTQ9UKG9 612 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 STK38LQ9Y2H1 464 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 TBC1D30Q9Y2I9 924 aa12.2□□□□□ -0.46
DDX39B-214ENST00000458640 SMIM31A0A1B0GVY4 71 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 CLRN2A0PK11 232 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 TMEM110-MUSTN1A8MSY1 372 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 LGALS16A8MUM7 142 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 KCNJ18B7U540 433 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 TCP10L2B9ZVM9 353 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 FOXN1O15353 648 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 HNRNPCP07910 306 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX39B-214ENST00000458640 ITGA2BP08514 1039 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 SNHG28P0DPA3 235 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 ALOX15P16050 662 aaPredicted RBP12.19□□□□□ -0.46
DDX39B-214ENST00000458640 MLH1P40692 756 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 NR5A1Q13285 461 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 KCNJ12Q14500 433 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 UAP1Q16222 522 aaPredicted RBP12.19□□□□□ -0.46
DDX39B-214ENST00000458640 ABCB5Q2M3G0 1257 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 KRT71Q3SY84 523 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 SH3BP5LQ7L8J4 393 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 TMEM110Q86TL2 294 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 LONP2Q86WA8 852 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 EXOC8Q8IYI6 725 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 HAUS1Q96CS2 278 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 TUBGCP5Q96RT8 1024 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 EIF2AQ9BY44 585 aaKnown RBP12.19□□□□□ -0.46
DDX39B-214ENST00000458640 GPCPD1Q9NPB8 672 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 DDX43Q9NXZ2 648 aaKnown RBP12.19□□□□□ -0.46
DDX39B-214ENST00000458640 NYAP2Q9P242 653 aa12.19□□□□□ -0.46
DDX39B-214ENST00000458640 MACROD2A1Z1Q3 448 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms