RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 SUCLA2Q9P2R7 463 aaPredicted RBP9.59□□□□□ -0.87
RIF1-208ENST00000457745 KAT6AQ92794 2004 aa9.59□□□□□ -0.87
RIF1-208ENST00000457745 SEPT4O43236 478 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 TREHO43280 583 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 DUSP11O75319 330 aaKnown RBP9.58□□□□□ -0.88
RIF1-208ENST00000457745 GYPCP04921 128 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 C6orf222P0C671 652 aaPredicted RBP9.58□□□□□ -0.88
RIF1-208ENST00000457745 SRGAP2CP0DJJ0 459 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 EEF1GP26641 437 aaKnown RBP9.58□□□□□ -0.88
RIF1-208ENST00000457745 CNGA1P29973 690 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 HOXC8P31273 242 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 NAMPTP43490 491 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 MTIF2P46199 727 aaKnown RBP9.58□□□□□ -0.88
RIF1-208ENST00000457745 FXR1P51114 621 aaKnown RBP eCLIP9.58□□□□□ -0.88
RIF1-208ENST00000457745 MARSP56192 900 aaKnown RBP9.58□□□□□ -0.88
RIF1-208ENST00000457745 NKX3-2P78367 333 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 CCZ1BP86790 482 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 CCZ1P86791 482 aaPredicted RBP9.58□□□□□ -0.88
RIF1-208ENST00000457745 TMEM62Q0P6H9 643 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 DMP1Q13316 513 aaPredicted RBP9.58□□□□□ -0.88
RIF1-208ENST00000457745 ADAM9Q13443 819 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 NFIL3Q16649 462 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 AMHR2Q16671 573 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 DGKDQ16760 1214 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 ZNF484Q5JVG2 852 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 FOXR2Q6PJQ5 311 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.58□□□□□ -0.88
RIF1-208ENST00000457745 TMEM139Q8IV31 216 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 KIAA0319LQ8IZA0 1049 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 RNF149Q8NC42 400 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 KLHDC9Q8NEP7 349 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 NOC3LQ8WTT2 800 aaKnown RBP9.58□□□□□ -0.88
RIF1-208ENST00000457745 SLC7A3Q8WY07 619 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 CEP63Q96MT8 703 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 ACCSQ96QU6 501 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 GBP3Q9H0R5 595 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 IFT122Q9HBG6 1241 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 WBP1LQ9NX94 342 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 HDAC6Q9UBN7 1215 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 SIK3Q9Y2K2 1263 aa9.58□□□□□ -0.88
RIF1-208ENST00000457745 PTPRJQ12913 1337 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 A0A087WZ62 844 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 MBLAC1A4D2B0 266 aaPredicted RBP9.57□□□□□ -0.88
RIF1-208ENST00000457745 N4BP3O15049 544 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 FAM189A1O60320 539 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 MSCO60682 206 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 MYCP01106 439 aaPredicted RBP9.57□□□□□ -0.88
RIF1-208ENST00000457745 HMGCRP04035 888 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 PPP1R2P41236 205 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 SLC26A2P50443 739 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 TPM4P67936 248 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 FKBP3Q00688 224 aaKnown RBP9.57□□□□□ -0.88
RIF1-208ENST00000457745 MBTD1Q05BQ5 628 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 SYCP1Q15431 976 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 VWA3BQ502W6 1294 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 IER5Q5VY09 327 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 CRELD2Q6UXH1 353 aaPredicted RBP9.57□□□□□ -0.88
RIF1-208ENST00000457745 RHPN2Q8IUC4 686 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 TMEM192Q8IY95 271 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 METTL13Q8N6R0 699 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 CEP120Q8N960 986 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 TC2NQ8N9U0 490 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 RDH13Q8NBN7 331 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 TMEM40Q8WWA1 233 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 KCNN1Q92952 543 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 SLC35C1Q96A29 364 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 NLRP4Q96MN2 994 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 TSG101Q99816 390 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 FDXACB1Q9BRP7 624 aaPredicted RBP9.57□□□□□ -0.88
RIF1-208ENST00000457745 TTYH3Q9C0H2 523 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 FAM49AQ9H0Q0 323 aaPredicted RBP9.57□□□□□ -0.88
RIF1-208ENST00000457745 AP5M1Q9H0R1 490 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 CXCL16Q9H2A7 254 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 ADAMTS10Q9H324 1103 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 SIX2Q9NPC8 291 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 SAGE1Q9NXZ1 904 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 HSPBP1Q9NZL4 362 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 Q9Y3F1 56 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 TRIM17Q9Y577 477 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 COL1A2P08123 1366 aa9.57□□□□□ -0.88
RIF1-208ENST00000457745 CALUO43852 315 aaPredicted RBP9.56□□□□□ -0.88
RIF1-208ENST00000457745 NOL4O94818 638 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 PIGRP01833 764 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 ACTN1P12814 892 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
RIF1-208ENST00000457745 TNFSF9P41273 254 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 GPC3P51654 580 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 ADKP55263 362 aaKnown RBP9.56□□□□□ -0.88
RIF1-208ENST00000457745 NLRP11P59045 1033 aaKnown RBP9.56□□□□□ -0.88
RIF1-208ENST00000457745 C1QTNF8P60827 252 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 UBXN1Q04323 297 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 SPAG1Q07617 926 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 PPP3CAQ08209 521 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 RBL2Q08999 1139 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 KIF22Q14807 665 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 MTFR1Q15390 333 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 KCNA10Q16322 511 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 MAN2A1Q16706 1144 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 NBPF20Q3BBV1 942 aa9.56□□□□□ -0.88
RIF1-208ENST00000457745 CCDC40Q4G0X9 1142 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms