RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CALR3Q96L12 384 aaKnown RBP18.08■□□□□ 0.48
CCDC43-202ENST00000457422 CYP39A1Q9NYL5 469 aa18.08■□□□□ 0.48
CCDC43-202ENST00000457422 GGA3Q9NZ52 723 aa18.08■□□□□ 0.48
CCDC43-202ENST00000457422 GABBR1Q9UBS5 961 aa18.08■□□□□ 0.48
CCDC43-202ENST00000457422 ZHX1Q9UKY1 873 aaPredicted RBP18.08■□□□□ 0.48
CCDC43-202ENST00000457422 CCDC169A6NNP5 214 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 ZNF862O60290 1169 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 ADRB2P07550 413 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 TNFAIP3P21580 790 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 ADSSP30520 456 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 MXI1P50539 228 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 TNNC1P63316 161 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 NNTQ13423 1086 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 PEX26Q7Z412 305 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 NT5DC3Q86UY8 548 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 ARHGEF19Q8IW93 802 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 ACAD9Q9H845 621 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 TELO2Q9Y4R8 837 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 GOLGA8IPA6NC78 632 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 GOLGA8JA6NMD2 632 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 TMCO5BA8MYB1 307 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 CLSTN1O94985 981 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 RTP1P59025 263 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 RNASE9P60153 205 aaKnown RBP18.07■□□□□ 0.48
CCDC43-202ENST00000457422 PPATQ06203 517 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 RASGEF1CQ8N431 466 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 SCFD2Q8WU76 684 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 CTNNBL1Q8WYA6 563 aaPredicted RBP18.07■□□□□ 0.48
CCDC43-202ENST00000457422 BSNDQ8WZ55 320 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 HES6Q96HZ4 224 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 AGPAT1Q99943 283 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 SGIP1Q9BQI5 828 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 TMEM117Q9H0C3 514 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 UBE2TQ9NPD8 197 aaPredicted RBP18.07■□□□□ 0.48
CCDC43-202ENST00000457422 A1CFQ9NQ94 594 aaKnown RBP18.07■□□□□ 0.48
CCDC43-202ENST00000457422 PDLIM7Q9NR12 457 aa18.07■□□□□ 0.48
CCDC43-202ENST00000457422 ANKRD62A6NC57 917 aa18.06■□□□□ 0.48
CCDC43-202ENST00000457422 ANKRD63C9JTQ0 380 aa18.06■□□□□ 0.48
CCDC43-202ENST00000457422 HEXIM1O94992 359 aaKnown RBP18.06■□□□□ 0.48
CCDC43-202ENST00000457422 PSAPP07602 524 aa18.06■□□□□ 0.48
CCDC43-202ENST00000457422 GLI1P08151 1106 aa18.06■□□□□ 0.48
CCDC43-202ENST00000457422 SNRNP35Q16560 246 aaKnown RBP18.06■□□□□ 0.48
CCDC43-202ENST00000457422 SND1Q7KZF4 910 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCDC43-202ENST00000457422 DAAM2Q86T65 1068 aa18.06■□□□□ 0.48
CCDC43-202ENST00000457422 METTL13Q8N6R0 699 aa18.06■□□□□ 0.48
CCDC43-202ENST00000457422 CEP170P1Q96L14 293 aa18.06■□□□□ 0.48
CCDC43-202ENST00000457422 JPH1Q9HDC5 661 aaPredicted RBP18.06■□□□□ 0.48
CCDC43-202ENST00000457422 TMOD4Q9NZQ9 345 aa18.06■□□□□ 0.48
CCDC43-202ENST00000457422 AGPSO00116 658 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 DGAT1O75907 488 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 CNGA1P29973 690 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 SOX10P56693 466 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 ENPEPQ07075 957 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 MCPH1Q8NEM0 835 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 SLC35G2Q8TBE7 412 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 FBXL18Q96ME1 805 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 KRT12Q99456 494 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.05■□□□□ 0.48
CCDC43-202ENST00000457422 KMT5AQ9NQR1 393 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 COQ4Q9Y3A0 265 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 IGSF9BQ9UPX0 1349 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 MYH9P35579 1960 aaKnown RBP18.05■□□□□ 0.48
CCDC43-202ENST00000457422 DENND3A2RUS2 1198 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 SPATA31C2B4DYI2 1134 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 PGRMC1O00264 195 aaKnown RBP18.05■□□□□ 0.48
CCDC43-202ENST00000457422 RNF40O75150 1001 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 HADHBP55084 474 aaKnown RBP18.05■□□□□ 0.48
CCDC43-202ENST00000457422 SP4Q02446 784 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 TCEAL1Q15170 157 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 SH3D19Q5HYK7 790 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 CBWD2Q8IUF1 395 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 SAAL1Q96ER3 474 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 OSGEPQ9NPF4 335 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 SEPT11Q9NVA2 429 aaKnown RBP18.05■□□□□ 0.48
CCDC43-202ENST00000457422 GPRC5DQ9NZD1 345 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 SLC9A2Q9UBY0 812 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 AMFRQ9UKV5 643 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 AFG3L2Q9Y4W6 797 aa18.05■□□□□ 0.48
CCDC43-202ENST00000457422 DICER1Q9UPY3 1922 aaKnown RBP18.04■□□□□ 0.48
CCDC43-202ENST00000457422 SPDYE16A6NNV3 312 aaPredicted RBP18.04■□□□□ 0.48
CCDC43-202ENST00000457422 CEP104O60308 925 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 SORBS3O60504 671 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 GGCXP38435 758 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 R3HDM1Q15032 1099 aaKnown RBP18.04■□□□□ 0.48
CCDC43-202ENST00000457422 GNPTABQ3T906 1256 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 SWSAP1Q6NVH7 229 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 ABHD15Q6UXT9 468 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 PALB2Q86YC2 1186 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 EIF1ADQ8N9N8 165 aaKnown RBP18.04■□□□□ 0.48
CCDC43-202ENST00000457422 TMC2Q8TDI7 906 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 PARD3BQ8TEW8 1205 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 HOXC10Q9NYD6 342 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 TAS2R14Q9NYV8 317 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 PFASO15067 1338 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 PTPRFP10586 1907 aa18.04■□□□□ 0.48
CCDC43-202ENST00000457422 FAM170AA1A519 330 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 GOLGA6BA6NDN3 693 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 CCDC188H7C350 402 aa18.03■□□□□ 0.48
CCDC43-202ENST00000457422 BUB1BO60566 1050 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-202ENST00000457422 ABCB4P21439 1286 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms