RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 CYP4A11Q02928 519 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 MTMR3Q13615 1198 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 CTTNQ14247 550 aaKnown RBP9.83□□□□□ -0.84
PKP4-207ENST00000457109 EMC2Q15006 297 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 CALCRLQ16602 461 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 TMEM132AQ24JP5 1023 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 RARS2Q5T160 578 aaKnown RBP9.83□□□□□ -0.84
PKP4-207ENST00000457109 KIAA1841Q6NSI8 718 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 NOTUMQ6P988 496 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 TDRD5Q8NAT2 981 aaKnown RBP9.83□□□□□ -0.84
PKP4-207ENST00000457109 TMEM175Q9BSA9 504 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 MFSD1Q9H3U5 465 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 DHX33Q9H6R0 707 aaKnown RBP9.83□□□□□ -0.84
PKP4-207ENST00000457109 NRDE2Q9H7Z3 1164 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 KCNMB3Q9NPA1 279 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 BMP2KQ9NSY1 1161 aaPredicted RBP9.83□□□□□ -0.84
PKP4-207ENST00000457109 AGPAT5Q9NUQ2 364 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 TPCN1Q9ULQ1 816 aa9.83□□□□□ -0.84
PKP4-207ENST00000457109 POMCP01189 267 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 SSBP05455 408 aaKnown RBP eCLIP9.82□□□□□ -0.84
PKP4-207ENST00000457109 URODP06132 367 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 TXKP42681 527 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 OR1G1P47890 313 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 SLC11A1P49279 550 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 KCNC3Q14003 757 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 MRPL10Q7Z7H8 261 aaKnown RBP9.82□□□□□ -0.84
PKP4-207ENST00000457109 FERMT3Q86UX7 667 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 KREMEN2Q8NCW0 462 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 AUTS2Q8WXX7 1259 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 CCDC51Q96ER9 411 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 CEP89Q96ST8 783 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 COLEC11Q9BWP8 271 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 ZBP1Q9H171 429 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 IFT122Q9HBG6 1241 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 ANKEF1Q9NU02 776 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 RGL1Q9NZL6 768 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 VAV3Q9UKW4 847 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 SORCS3Q9UPU3 1222 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 IRAK3Q9Y616 596 aa9.82□□□□□ -0.84
PKP4-207ENST00000457109 DGAT1O75907 488 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 ADH1AP07327 375 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 NCLP19338 710 aaKnown RBP9.81□□□□□ -0.84
PKP4-207ENST00000457109 NEK4P51957 841 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 NUBP1P53384 320 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 AK2P54819 239 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 POU5F1BQ06416 359 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 GNL2Q13823 731 aaKnown RBP9.81□□□□□ -0.84
PKP4-207ENST00000457109 NPY5RQ15761 445 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 TMC5Q6UXY8 1006 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 OTOP3Q7RTS5 596 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 ZNF280BQ86YH2 543 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 POTEDQ86YR6 584 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 C12orf76Q8N812 135 aaPredicted RBP9.81□□□□□ -0.84
PKP4-207ENST00000457109 ZNF579Q8NAF0 562 aaKnown RBP9.81□□□□□ -0.84
PKP4-207ENST00000457109 OXER1Q8TDS5 423 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 HAS1Q92839 578 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 EIF2AK1Q9BQI3 630 aaKnown RBP9.81□□□□□ -0.84
PKP4-207ENST00000457109 APOL6Q9BWW8 343 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 TTC12Q9H892 705 aaPredicted RBP9.81□□□□□ -0.84
PKP4-207ENST00000457109 SFXN1Q9H9B4 322 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 DNAJB4Q9UDY4 337 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 LIMD1Q9UGP4 676 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 USTQ9Y2C2 406 aa9.81□□□□□ -0.84
PKP4-207ENST00000457109 C2CD4DB7Z1M9 353 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 STK25O00506 426 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 C2CD2LO14523 706 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 NRP1O14786 923 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 NEMFO60524 1076 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 SLITRK3O94933 977 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 WEE2P0C1S8 567 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 XRCC6P12956 609 aaKnown RBP eCLIP9.8□□□□□ -0.84
PKP4-207ENST00000457109 EPCAMP16422 314 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 ATP2B1P20020 1258 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 RFX1P22670 979 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 AVPR2P30518 371 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 HOXA11P31270 313 aaPredicted RBP9.8□□□□□ -0.84
PKP4-207ENST00000457109 PTENP60484 403 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 NR5A1Q13285 461 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 AGMOQ6ZNB7 445 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 CCDC149Q6ZUS6 474 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 ZDHHC14Q8IZN3 488 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 NECAB1Q8N987 351 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 ERMNQ8TAM6 284 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 STAMQ92783 540 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 ATOH1Q92858 354 aaPredicted RBP9.8□□□□□ -0.84
PKP4-207ENST00000457109 KLHL5Q96PQ7 755 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 RPS6KC1Q96S38 1066 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 CSRNP2Q9H175 543 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 POMKQ9H5K3 350 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 PIDD1Q9HB75 910 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 GJB4Q9NTQ9 266 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 PPP4R2Q9NY27 417 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 PARP2Q9UGN5 583 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 PRG3Q9Y2Y8 225 aaPredicted RBP9.8□□□□□ -0.84
PKP4-207ENST00000457109 BRWD1Q9NSI6 2320 aa9.8□□□□□ -0.84
PKP4-207ENST00000457109 MYO7AQ13402 2215 aa9.79□□□□□ -0.84
PKP4-207ENST00000457109 NLRC5Q86WI3 1866 aa9.79□□□□□ -0.84
PKP4-207ENST00000457109 ARL5CA6NH57 179 aa9.79□□□□□ -0.84
PKP4-207ENST00000457109 LRRIQ4A6NIV6 560 aa9.79□□□□□ -0.84
PKP4-207ENST00000457109 MEIS3P2A8K0S8 358 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms