RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 MYCLP1P12525 358 aaPredicted RBP6.07□□□□□ -1.44
VPS41-209ENST00000457055 IGFBP6P24592 240 aaPredicted RBP6.07□□□□□ -1.44
VPS41-209ENST00000457055 RENBPP51606 427 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 APBA1Q02410 837 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 CCDC173Q0VFZ6 552 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 TRAF1Q13077 416 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 GRM1Q13255 1194 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 SYCP1Q15431 976 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 GFOD2Q3B7J2 385 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 TKFCQ3LXA3 575 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 CCDC152Q4G0S7 254 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 CCDC122Q5T0U0 273 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 MEX3CQ5U5Q3 659 aaKnown RBP6.07□□□□□ -1.44
VPS41-209ENST00000457055 BICRALQ6AI39 1079 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 ABRAXAS1Q6UWZ7 409 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 RTL10Q7L3V2 364 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 BEND5Q7L4P6 421 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 SDCCAG8Q86SQ7 713 aaPredicted RBP6.07□□□□□ -1.44
VPS41-209ENST00000457055 DDX42Q86XP3 938 aaKnown RBP eCLIP6.07□□□□□ -1.44
VPS41-209ENST00000457055 CCDC65Q8IXS2 484 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 TP53I13Q8NBR0 393 aaPredicted RBP6.07□□□□□ -1.44
VPS41-209ENST00000457055 BRF1Q92994 677 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 TEPSINQ96N21 525 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 FERD3LQ96RJ6 166 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 TACO1Q9BSH4 297 aaKnown RBP6.07□□□□□ -1.44
VPS41-209ENST00000457055 GP6Q9HCN6 339 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 PIH1D1Q9NWS0 290 aaKnown RBP6.07□□□□□ -1.44
VPS41-209ENST00000457055 DGKBQ9Y6T7 804 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 KIDINS220Q9ULH0 1771 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 ITSN2Q9NZM3 1697 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 IRS2Q9Y4H2 1338 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 MYO5CQ9NQX4 1742 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 A0A0B4J203 849 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 KLRG2A4D1S0 409 aaPredicted RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 FGF10O15520 208 aaPredicted RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 SRGAP3O43295 1099 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 AKAP10O43572 662 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 MYO1BO43795 1136 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 KINO60870 393 aaKnown RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 CDKL5O76039 1030 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 SSBP05455 408 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS41-209ENST00000457055 TRIM27P14373 513 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 ZSCAN20P17040 1043 aaPredicted RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 KRT20P35900 424 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 ZNF445P59923 1031 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 GABREP78334 506 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 TMF1P82094 1093 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 TARBP2Q15633 366 aaKnown RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 PREPLQ4J6C6 727 aaPredicted RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 C10orf76Q5T2E6 689 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 ZNF772Q68DY9 489 aaPredicted RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 PAQR3Q6TCH7 311 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 FIP1L1Q6UN15 594 aaKnown RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 DBX2Q6ZNG2 339 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 EEPD1Q7L9B9 569 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 SRLQ86TD4 932 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 FIBCD1Q8N539 461 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 TAB3Q8N5C8 712 aaPredicted RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 KIAA1524Q8TCG1 905 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 USP33Q8TEY7 942 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 JAKMIP2Q96AA8 810 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 TM9SF2Q99805 663 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 ELAC2Q9BQ52 826 aaKnown RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 NACA2Q9H009 215 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 KIAA1586Q9HCI6 787 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 TCF7L2Q9NQB0 619 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 PDLIM7Q9NR12 457 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 DDX21Q9NR30 783 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS41-209ENST00000457055 SMYD2Q9NRG4 433 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 FAM86C1Q9NVL1 165 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 MCM8Q9UJA3 840 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 BLOC1S6Q9UL45 172 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 NOB1Q9ULX3 412 aaKnown RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 BARX2Q9UMQ3 279 aaPredicted RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 TRIM17Q9Y577 477 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 HCFC2Q9Y5Z7 792 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 FHOD1Q9Y613 1164 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 FAM135BQ49AJ0 1406 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 CNTLNQ9NXG0 1405 aa6.06□□□□□ -1.44
VPS41-209ENST00000457055 BRD4O60885 1362 aaPredicted RBP6.06□□□□□ -1.44
VPS41-209ENST00000457055 A2ML1A8K2U0 1454 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 GOLGA6L10A0A0M3HER8 536 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 TSPY2A6NKD2 308 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 CCDC85CA6NKD9 419 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 J3KRW8 73 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 FFAR3O14843 346 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 B3GALNT1O75752 331 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 TP53P04637 393 aaPredicted RBP6.05□□□□□ -1.44
VPS41-209ENST00000457055 TSPY3P0CV98 308 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 TSPY8P0CW00 308 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 FERP16591 822 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 TYRP1P17643 537 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 TACR1P25103 407 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 YY1P25490 414 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 ALDH1B1P30837 517 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 TNNT3P45378 269 aaPredicted RBP6.05□□□□□ -1.44
VPS41-209ENST00000457055 NOP2P46087 812 aaKnown RBP6.05□□□□□ -1.44
VPS41-209ENST00000457055 RXRGP48443 463 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 CCT5P48643 541 aa6.05□□□□□ -1.44
VPS41-209ENST00000457055 TSPY1Q01534 308 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms