RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 KCNMB3Q9NPA1 279 aa13.35□□□□□ -0.27
LMCD1-206ENST00000456506 CYP26B1Q9NR63 512 aa13.35□□□□□ -0.27
LMCD1-206ENST00000456506 DBR1Q9UK59 544 aaKnown RBP13.35□□□□□ -0.27
LMCD1-206ENST00000456506 INPP5FQ9Y2H2 1132 aa13.35□□□□□ -0.27
LMCD1-206ENST00000456506 RIF1Q5UIP0 2472 aaKnown RBP13.34□□□□□ -0.27
LMCD1-206ENST00000456506 CARNS1A5YM72 827 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 INPPL1O15357 1258 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 PI15O43692 258 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 DNM2P50570 870 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 NPEPPSP55786 919 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 NLRP5P59047 1200 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 PSMC5P62195 406 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 PPP2R5CQ13362 524 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 CENPQQ7L2Z9 268 aaPredicted RBP13.34□□□□□ -0.27
LMCD1-206ENST00000456506 CATSPER4Q7RTX7 472 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 PPFIBP1Q86W92 1011 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 BLIDQ8IZY5 108 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 CMASQ8NFW8 434 aaPredicted RBP13.34□□□□□ -0.27
LMCD1-206ENST00000456506 NLRP4Q96MN2 994 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 AIFM3Q96NN9 605 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 TMEM175Q9BSA9 504 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 RHOBTB2Q9BYZ6 727 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 INO80BQ9C086 356 aaPredicted RBP13.34□□□□□ -0.27
LMCD1-206ENST00000456506 DUSP12Q9UNI6 340 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 COL4A3BPQ9Y5P4 624 aa13.34□□□□□ -0.27
LMCD1-206ENST00000456506 GVINP1Q7Z2Y8 2422 aa13.33□□□□□ -0.27
LMCD1-206ENST00000456506 CACNA1AO00555 2505 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 DDX11L8A8MPP1 907 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 NRP1O14786 923 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 AOC1P19801 751 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 CA8P35219 290 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 AKAP17AQ02040 695 aaKnown RBP13.33□□□□□ -0.28
LMCD1-206ENST00000456506 TDGQ13569 410 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 BMS1Q14692 1282 aaKnown RBP13.33□□□□□ -0.28
LMCD1-206ENST00000456506 POTEGQ6S5H5 508 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 C15orf39Q6ZRI6 1047 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 CABP7Q86V35 215 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 SMG8Q8ND04 991 aaKnown RBP13.33□□□□□ -0.28
LMCD1-206ENST00000456506 C22orf23Q9BZE7 217 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 GBP3Q9H0R5 595 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 KCNK12Q9HB15 430 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 PDCD11Q14690 1871 aaKnown RBP13.33□□□□□ -0.28
LMCD1-206ENST00000456506 CNTNAP2Q9UHC6 1331 aa13.33□□□□□ -0.28
LMCD1-206ENST00000456506 NCLP19338 710 aaKnown RBP13.32□□□□□ -0.28
LMCD1-206ENST00000456506 QARSP47897 775 aaKnown RBP13.32□□□□□ -0.28
LMCD1-206ENST00000456506 RNASELQ05823 741 aaKnown RBP13.32□□□□□ -0.28
LMCD1-206ENST00000456506 DSC1Q08554 894 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 SPIRE1Q08AE8 756 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 LETM2Q2VYF4 491 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 KIAA0319Q5VV43 1072 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 CCDC149Q6ZUS6 474 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 TAS1R1Q7RTX1 841 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 FRMD5Q7Z6J6 570 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 CCDC105Q8IYK2 499 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 COLGALT2Q8IYK4 626 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 FAM177A1Q8N128 213 aaPredicted RBP13.32□□□□□ -0.28
LMCD1-206ENST00000456506 PRPF31Q8WWY3 499 aaKnown RBP13.32□□□□□ -0.28
LMCD1-206ENST00000456506 HAS1Q92839 578 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 PGBD4Q96DM1 585 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 HERC2P3Q9BVR0 1158 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 RSAD1Q9HA92 442 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 RXFP1Q9HBX9 757 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 ZSWIM6Q9HCJ5 1215 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 DDX25Q9UHL0 483 aaKnown RBP13.32□□□□□ -0.28
LMCD1-206ENST00000456506 COL4A2P08572 1712 aa13.32□□□□□ -0.28
LMCD1-206ENST00000456506 F8W810 466 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 TEX28O15482 410 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 NARSO43776 548 aaKnown RBP13.31□□□□□ -0.28
LMCD1-206ENST00000456506 DEXIO95424 95 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 POMCP01189 267 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 SOD2P04179 222 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 SSBP05455 408 aaKnown RBP eCLIP13.31□□□□□ -0.28
LMCD1-206ENST00000456506 LAMTOR4Q0VGL1 99 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 NONOQ15233 471 aaKnown RBP eCLIP13.31□□□□□ -0.28
LMCD1-206ENST00000456506 INF2Q27J81 1249 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 RUFY3Q7L099 469 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 OTOP3Q7RTS5 596 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 SRGAP1Q7Z6B7 1085 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 GSTCDQ8NEC7 633 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 TMEM143Q96AN5 459 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 ZNF707Q96C28 371 aaPredicted RBP13.31□□□□□ -0.28
LMCD1-206ENST00000456506 ACSF2Q96CM8 615 aaPredicted RBP13.31□□□□□ -0.28
LMCD1-206ENST00000456506 RPS6KC1Q96S38 1066 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 JPH2Q9BR39 696 aaPredicted RBP13.31□□□□□ -0.28
LMCD1-206ENST00000456506 PHF20Q9BVI0 1012 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 EMILIN2Q9BXX0 1053 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 XPNPEP1Q9NQW7 623 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 MAN1C1Q9NR34 630 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 MIOSQ9NXC5 875 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 STK39Q9UEW8 545 aa13.31□□□□□ -0.28
LMCD1-206ENST00000456506 KRBA1A5PL33 1030 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 ZBTB39O15060 712 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 TSPAN1O60635 241 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 ALDH2P05091 517 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 P4HBP07237 508 aaKnown RBP13.3□□□□□ -0.28
LMCD1-206ENST00000456506 KLRC2P26717 231 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 SSRP1Q08945 709 aaKnown RBP13.3□□□□□ -0.28
LMCD1-206ENST00000456506 AMHR2Q16671 573 aa13.3□□□□□ -0.28
LMCD1-206ENST00000456506 PPP4R3AQ6IN85 833 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms