RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 UBA7P41226 1012 aa19.18■□□□□ 0.66
USP39-208ENST00000455732 NASPP49321 788 aaPredicted RBP19.18■□□□□ 0.66
USP39-208ENST00000455732 RINT1Q6NUQ1 792 aa19.18■□□□□ 0.66
USP39-208ENST00000455732 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
USP39-208ENST00000455732 C1orf186Q6ZWK4 172 aa19.18■□□□□ 0.66
USP39-208ENST00000455732 ZBTB8OSQ8IWT0 167 aa19.18■□□□□ 0.66
USP39-208ENST00000455732 SYT2Q8N9I0 419 aaPredicted RBP19.18■□□□□ 0.66
USP39-208ENST00000455732 PRIMPOLQ96LW4 560 aa19.18■□□□□ 0.66
USP39-208ENST00000455732 RUSC1Q9BVN2 902 aa19.18■□□□□ 0.66
USP39-208ENST00000455732 AAASQ9NRG9 546 aa19.18■□□□□ 0.66
USP39-208ENST00000455732 KCND2Q9NZV8 630 aa19.18■□□□□ 0.66
USP39-208ENST00000455732 PCDHB12Q9Y5F1 795 aa19.18■□□□□ 0.66
USP39-208ENST00000455732 ZSCAN22P10073 491 aaPredicted RBP19.17■□□□□ 0.66
USP39-208ENST00000455732 GUCY2CP25092 1073 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 SLC12A3P55017 1021 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 NCBP1Q09161 790 aaKnown RBP19.17■□□□□ 0.66
USP39-208ENST00000455732 SLC39A14Q15043 492 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 ZRSR1Q15695 479 aaKnown RBP19.17■□□□□ 0.66
USP39-208ENST00000455732 FAM187BQ17R55 369 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 UBXN11Q5T124 520 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 SPOUT1Q5T280 376 aaKnown RBP19.17■□□□□ 0.66
USP39-208ENST00000455732 NOTUMQ6P988 496 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 ABI1Q8IZP0 508 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 LRRC43Q8N309 656 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 COLGALT1Q8NBJ5 622 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 RNF169Q8NCN4 708 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 POF1BQ8WVV4 589 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 CALML4Q96GE6 196 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 IFT74Q96LB3 600 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 CCSER1Q9C0I3 900 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 FZD8Q9H461 694 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 PRMT7Q9NVM4 692 aaPredicted RBP19.17■□□□□ 0.66
USP39-208ENST00000455732 PCDHB2Q9Y5E7 798 aa19.17■□□□□ 0.66
USP39-208ENST00000455732 PLA2G4BP0C869 781 aa19.16■□□□□ 0.66
USP39-208ENST00000455732 LAG3P18627 525 aa19.16■□□□□ 0.66
USP39-208ENST00000455732 MARCKSP29966 332 aaPredicted RBP19.16■□□□□ 0.66
USP39-208ENST00000455732 MAPK7Q13164 816 aa19.16■□□□□ 0.66
USP39-208ENST00000455732 MRPL10Q7Z7H8 261 aaKnown RBP19.16■□□□□ 0.66
USP39-208ENST00000455732 DAW1Q8N136 415 aa19.16■□□□□ 0.66
USP39-208ENST00000455732 HELQQ8TDG4 1101 aa19.16■□□□□ 0.66
USP39-208ENST00000455732 PGBD4Q96DM1 585 aa19.16■□□□□ 0.66
USP39-208ENST00000455732 PABPC5Q96DU9 382 aaKnown RBP19.16■□□□□ 0.66
USP39-208ENST00000455732 DRC1Q96MC2 740 aa19.16■□□□□ 0.66
USP39-208ENST00000455732 MRPL9Q9BYD2 267 aaKnown RBP19.16■□□□□ 0.66
USP39-208ENST00000455732 CCDC113Q9H0I3 377 aa19.16■□□□□ 0.66
USP39-208ENST00000455732 CSRNP2Q9H175 543 aa19.16■□□□□ 0.66
USP39-208ENST00000455732 C17orf75Q9HAS0 396 aa19.16■□□□□ 0.66
USP39-208ENST00000455732 MEIS3P2A8K0S8 358 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 HIP1RO75146 1068 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 FGF18O76093 207 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 F13A1P00488 732 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 ARF4P18085 180 aaPredicted RBP19.15■□□□□ 0.66
USP39-208ENST00000455732 IRS1P35568 1242 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 EFNA5P52803 228 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 CEBPZQ03701 1054 aaKnown RBP19.15■□□□□ 0.66
USP39-208ENST00000455732 UBE3AQ05086 875 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 HYAL1Q12794 435 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 CSPP1Q1MSJ5 1256 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 CTC1Q2NKJ3 1217 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 CNNM3Q8NE01 707 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 DEPTORQ8TB45 409 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 LPPQ93052 612 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 ZNF396Q96N95 335 aaPredicted RBP19.15■□□□□ 0.66
USP39-208ENST00000455732 DAXXQ9UER7 740 aaPredicted RBP19.15■□□□□ 0.66
USP39-208ENST00000455732 CNTNAP2Q9UHC6 1331 aa19.15■□□□□ 0.66
USP39-208ENST00000455732 TDRD15B5MCY1 1934 aaKnown RBP19.14■□□□□ 0.65
USP39-208ENST00000455732 A0A1B0GUA9 196 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 B4GALT5O43286 388 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 PLCG1P19174 1290 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 NCLP19338 710 aaKnown RBP19.14■□□□□ 0.65
USP39-208ENST00000455732 KCNA5P22460 613 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 KARSQ15046 597 aaKnown RBP19.14■□□□□ 0.65
USP39-208ENST00000455732 MAPK6Q16659 721 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 LEXMQ3ZCV2 418 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 KCNT2Q6UVM3 1135 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 GLB1LQ6UWU2 654 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 KRI1Q8N9T8 703 aaKnown RBP19.14■□□□□ 0.65
USP39-208ENST00000455732 LINC00301Q8NCQ3 95 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.14■□□□□ 0.65
USP39-208ENST00000455732 LRRC15Q8TF66 581 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 CPB2Q96IY4 423 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 NECAB3Q96P71 396 aaPredicted RBP19.14■□□□□ 0.65
USP39-208ENST00000455732 PLIN2Q99541 437 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 BLOC1S4Q9NUP1 217 aa19.14■□□□□ 0.65
USP39-208ENST00000455732 ACKR2O00590 384 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 NCK2O43639 380 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 CSPG5O95196 566 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 YEATS4O95619 227 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 PRKCBP05771 671 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 GTF2F1P35269 517 aaKnown RBP eCLIP19.13■□□□□ 0.65
USP39-208ENST00000455732 LTBRP36941 435 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 NPTX2P47972 431 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 PLCB3Q01970 1234 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 DMP1Q13316 513 aaPredicted RBP19.13■□□□□ 0.65
USP39-208ENST00000455732 PKP1Q13835 747 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 SLC27A1Q6PCB7 646 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 AGMOQ6ZNB7 445 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 ADGRD2Q7Z7M1 963 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 THNSL1Q8IYQ7 743 aa19.13■□□□□ 0.65
USP39-208ENST00000455732 RAD54LQ92698 747 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms