RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 ZNF558Q96NG5 402 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 EIF2AQ9BY44 585 aaKnown RBP16.14■□□□□ 0.17
HSPG2-207ENST00000453796 CSRNP2Q9H175 543 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 TBC1D13Q9NVG8 400 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 NCOR1O75376 2440 aa16.14■□□□□ 0.17
HSPG2-207ENST00000453796 VWA3AA6NCI4 1184 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 LRRIQ4A6NIV6 560 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 FSCN2O14926 492 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 CSPG5O95196 566 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 PDCP20941 246 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 SYT1P21579 422 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 GTF2F1P35269 517 aaKnown RBP eCLIP16.13■□□□□ 0.17
HSPG2-207ENST00000453796 LTBRP36941 435 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 NAMPTP43490 491 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 ERVFC1P60507 584 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 FAM187BQ17R55 369 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 NOMO2Q5JPE7 1267 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 GLB1LQ6UWU2 654 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 SLC39A11Q8N1S5 342 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 CNNM3Q8NE01 707 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.13■□□□□ 0.17
HSPG2-207ENST00000453796 ADAMTS19Q8TE59 1207 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 MRPS27Q92552 414 aaKnown RBP16.13■□□□□ 0.17
HSPG2-207ENST00000453796 SNX21Q969T3 373 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 PRIMPOLQ96LW4 560 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 PNMA5Q96PV4 448 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 CCDC113Q9H0I3 377 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 FZD8Q9H461 694 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 NRDE2Q9H7Z3 1164 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 RSAD1Q9HA92 442 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 TLR9Q9NR96 1032 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 IPPQ9Y573 584 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 PCDHGC5Q9Y5F6 944 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 CNTNAP2Q9UHC6 1331 aa16.13■□□□□ 0.17
HSPG2-207ENST00000453796 A0A1B0GUA9 196 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 VPS37CA5D8V6 355 aaPredicted RBP16.12■□□□□ 0.17
HSPG2-207ENST00000453796 INPPL1O15357 1258 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 NCK2O43639 380 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 B4GALT3O60512 393 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 EDN1P05305 212 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 KCNA5P22460 613 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 PPM1AP35813 382 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 AFF1P51825 1210 aaKnown RBP16.12■□□□□ 0.17
HSPG2-207ENST00000453796 BCAR1P56945 870 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 RESTQ13127 1097 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 DAW1Q8N136 415 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 KCTD17Q8N5Z5 321 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 KIFAP3Q92845 792 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 C2orf40Q9H1Z8 148 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 POLD4Q9HCU8 107 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 PRMT7Q9NVM4 692 aaPredicted RBP16.12■□□□□ 0.17
HSPG2-207ENST00000453796 SPG21Q9NZD8 308 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 DNM3Q9UQ16 869 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 TRIP11Q15643 1979 aa16.12■□□□□ 0.17
HSPG2-207ENST00000453796 TTLL13PA6NNM8 815 aa16.11■□□□□ 0.17
HSPG2-207ENST00000453796 LINC01565O15544 149 aa16.11■□□□□ 0.17
HSPG2-207ENST00000453796 DLX2Q07687 328 aaPredicted RBP16.11■□□□□ 0.17
HSPG2-207ENST00000453796 NCBP1Q09161 790 aaKnown RBP16.11■□□□□ 0.17
HSPG2-207ENST00000453796 MAPK7Q13164 816 aa16.11■□□□□ 0.17
HSPG2-207ENST00000453796 ADAM15Q13444 863 aa16.11■□□□□ 0.17
HSPG2-207ENST00000453796 SF3A1Q15459 793 aaKnown RBP16.11■□□□□ 0.17
HSPG2-207ENST00000453796 PDE12Q6L8Q7 609 aaKnown RBP16.11■□□□□ 0.17
HSPG2-207ENST00000453796 RINT1Q6NUQ1 792 aa16.11■□□□□ 0.17
HSPG2-207ENST00000453796 SLC27A1Q6PCB7 646 aa16.11■□□□□ 0.17
HSPG2-207ENST00000453796 C1orf186Q6ZWK4 172 aa16.11■□□□□ 0.17
HSPG2-207ENST00000453796 UHRF1Q96T88 793 aaPredicted RBP16.11■□□□□ 0.17
HSPG2-207ENST00000453796 RNF39Q9H2S5 420 aa16.11■□□□□ 0.17
HSPG2-207ENST00000453796 CLDND1Q9NY35 253 aa16.11■□□□□ 0.17
HSPG2-207ENST00000453796 DNAJB4Q9UDY4 337 aa16.11■□□□□ 0.17
HSPG2-207ENST00000453796 INPP5FQ9Y2H2 1132 aa16.11■□□□□ 0.17
HSPG2-207ENST00000453796 HES2Q9Y543 173 aa16.11■□□□□ 0.17
HSPG2-207ENST00000453796 NT5C1B-RDH14C9J2C7 533 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 H3BQ06 376 aaPredicted RBP16.1■□□□□ 0.17
HSPG2-207ENST00000453796 ZC3H11AO75152 810 aaKnown RBP eCLIP16.1■□□□□ 0.17
HSPG2-207ENST00000453796 TBX10O75333 385 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 DDHD2O94830 711 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 BMP15O95972 392 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 GALTP07902 379 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 ITGA4P13612 1032 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 GRIN1Q05586 938 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 PPP2R5AQ15172 486 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 TMEM119Q4V9L6 283 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 TMEM173Q86WV6 379 aaPredicted RBP16.1■□□□□ 0.17
HSPG2-207ENST00000453796 CDR2LQ86X02 465 aaPredicted RBP16.1■□□□□ 0.17
HSPG2-207ENST00000453796 ZNF280BQ86YH2 543 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 ZBTB8OSQ8IWT0 167 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 AK8Q96MA6 479 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 NECAB3Q96P71 396 aaPredicted RBP16.1■□□□□ 0.17
HSPG2-207ENST00000453796 RUSC1Q9BVN2 902 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 NT5C3AQ9H0P0 336 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 NXF3Q9H4D5 531 aaKnown RBP16.1■□□□□ 0.17
HSPG2-207ENST00000453796 UBN1Q9NPG3 1134 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 MTMR6Q9Y217 621 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 C5orf42Q9H799 3197 aa16.1■□□□□ 0.17
HSPG2-207ENST00000453796 CARNS1A5YM72 827 aa16.09■□□□□ 0.17
HSPG2-207ENST00000453796 SLC26A4O43511 780 aa16.09■□□□□ 0.17
HSPG2-207ENST00000453796 HIP1RO75146 1068 aa16.09■□□□□ 0.17
HSPG2-207ENST00000453796 NPTXRO95502 500 aa16.09■□□□□ 0.17
HSPG2-207ENST00000453796 GLP2RO95838 553 aa16.09■□□□□ 0.17
HSPG2-207ENST00000453796 PRKCBP05771 671 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms