RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 CTNNB1P35222 781 aa16.19■□□□□ 0.18
VPS16-205ENST00000453689 NAMPTP43490 491 aa16.19■□□□□ 0.18
VPS16-205ENST00000453689 PCBP1Q15365 356 aaKnown RBP eCLIP16.19■□□□□ 0.18
VPS16-205ENST00000453689 AMHR2Q16671 573 aa16.19■□□□□ 0.18
VPS16-205ENST00000453689 CCDC73Q6ZRK6 1079 aa16.19■□□□□ 0.18
VPS16-205ENST00000453689 SYT2Q8N9I0 419 aaPredicted RBP16.19■□□□□ 0.18
VPS16-205ENST00000453689 LRRC15Q8TF66 581 aa16.19■□□□□ 0.18
VPS16-205ENST00000453689 MRPS27Q92552 414 aaKnown RBP16.19■□□□□ 0.18
VPS16-205ENST00000453689 CPB2Q96IY4 423 aa16.19■□□□□ 0.18
VPS16-205ENST00000453689 RWDD3Q9Y3V2 267 aa16.19■□□□□ 0.18
VPS16-205ENST00000453689 MTCH2Q9Y6C9 303 aa16.19■□□□□ 0.18
VPS16-205ENST00000453689 FAM237AA0A1B0GTK4 181 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 C5orf67F2Z3F1 127 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 HOXA2O43364 376 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 GTPBP6O43824 516 aaPredicted RBP16.18■□□□□ 0.18
VPS16-205ENST00000453689 SSBP05455 408 aaKnown RBP eCLIP16.18■□□□□ 0.18
VPS16-205ENST00000453689 PLA2G4BP0C869 781 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 SKIP12755 728 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 AXLP30530 894 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 BMPR1AP36894 532 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 RAB27AP51159 221 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 SLC12A3P55017 1021 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 MAPK7Q13164 816 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 PPP2R5AQ15172 486 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 CLLU1OSQ5K130 101 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 UBXN11Q5T124 520 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 RRAGBQ5VZM2 374 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 ZBTB8OSQ8IWT0 167 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 DAW1Q8N136 415 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 FSIP1Q8NA03 581 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 IFT74Q96LB3 600 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 CASD1Q96PB1 797 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 TMEM117Q9H0C3 514 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 C2orf40Q9H1Z8 148 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 BLOC1S4Q9NUP1 217 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 HCSTQ9UBK5 93 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 STK17AQ9UEE5 414 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 HPSEQ9Y251 543 aa16.18■□□□□ 0.18
VPS16-205ENST00000453689 PDCD11Q14690 1871 aaKnown RBP16.18■□□□□ 0.18
VPS16-205ENST00000453689 A0A087X0B3 334 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 MEIS3P2A8K0S8 358 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 GOLGA6L22H0YM25 854 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 H3BNC9 293 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 B4GALT5O43286 388 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 ZNF623O75123 536 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 HIP1RO75146 1068 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 PFKFB1P16118 471 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 ARF4P18085 180 aaPredicted RBP16.17■□□□□ 0.18
VPS16-205ENST00000453689 GUCY2CP25092 1073 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 GPM6BQ13491 265 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 LONRF3Q496Y0 759 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 NOTUMQ6P988 496 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 ABI1Q8IZP0 508 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 MICALL1Q8N3F8 863 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 DEPTORQ8TB45 409 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 HELQQ8TDG4 1101 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 LPPQ93052 612 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 PYM1Q9BRP8 204 aaKnown RBP16.17■□□□□ 0.18
VPS16-205ENST00000453689 KIFC3Q9BVG8 833 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 TIPINQ9BVW5 301 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 CCDC113Q9H0I3 377 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 CWH43Q9H720 699 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 PRMT7Q9NVM4 692 aaPredicted RBP16.17■□□□□ 0.18
VPS16-205ENST00000453689 KCNH3Q9ULD8 1083 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 PCDHB2Q9Y5E7 798 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 MYO7AQ13402 2215 aa16.17■□□□□ 0.18
VPS16-205ENST00000453689 A0A1B0GVL5 298 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 RB1P06400 928 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 STAT6P42226 847 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 PEX3P56589 373 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 UBE2HP62256 183 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 NCBP1Q09161 790 aaKnown RBP16.16■□□□□ 0.18
VPS16-205ENST00000453689 RAD51AP2Q09MP3 1159 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 CCDC85BQ15834 202 aaPredicted RBP16.16■□□□□ 0.18
VPS16-205ENST00000453689 FAM187BQ17R55 369 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 TPRNQ4KMQ1 711 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 ARSHQ5FYA8 562 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 SPOUT1Q5T280 376 aaKnown RBP16.16■□□□□ 0.18
VPS16-205ENST00000453689 LRRC55Q6ZSA7 311 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 MRPL10Q7Z7H8 261 aaKnown RBP16.16■□□□□ 0.18
VPS16-205ENST00000453689 PDILTQ8N807 584 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 PPM1EQ8WY54 764 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 RAD54LQ92698 747 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 CCDC51Q96ER9 411 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 PRIMPOLQ96LW4 560 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 DRC1Q96MC2 740 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 C11orf84Q9BUA3 381 aaPredicted RBP16.16■□□□□ 0.18
VPS16-205ENST00000453689 PLVAPQ9BX97 442 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 EIF2AQ9BY44 585 aaKnown RBP16.16■□□□□ 0.18
VPS16-205ENST00000453689 FZD8Q9H461 694 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 GOLPH3LQ9H4A5 285 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 TYW1Q9NV66 732 aaKnown RBP16.16■□□□□ 0.18
VPS16-205ENST00000453689 LMCD1Q9NZU5 365 aa16.16■□□□□ 0.18
VPS16-205ENST00000453689 NPHP3-ACAD11A0A0J9YXS1 232 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 TTLL13PA6NNM8 815 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 SFI1A8K8P3 1242 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 GADD45BO75293 160 aaPredicted RBP16.15■□□□□ 0.18
VPS16-205ENST00000453689 PRPF40AO75400 957 aaKnown RBP16.15■□□□□ 0.18
VPS16-205ENST00000453689 PRKCBP05771 671 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms