RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ZBTB39O15060 712 aa24.04■■□□□ 1.44
C9orf3-208ENST00000451893 BRD1O95696 1058 aa24.04■■□□□ 1.44
C9orf3-208ENST00000451893 TRIM6Q9C030 488 aaPredicted RBP24.04■■□□□ 1.44
C9orf3-208ENST00000451893 FSCN2O14926 492 aa24.03■■□□□ 1.44
C9orf3-208ENST00000451893 SLC39A11Q8N1S5 342 aa24.03■■□□□ 1.44
C9orf3-208ENST00000451893 KHSRPQ92945 711 aaKnown RBP eCLIP24.03■■□□□ 1.44
C9orf3-208ENST00000451893 GBP4Q96PP9 640 aa24.03■■□□□ 1.44
C9orf3-208ENST00000451893 DCXO43602 365 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 STX6O43752 255 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 USO1O60763 962 aaKnown RBP24.02■■□□□ 1.44
C9orf3-208ENST00000451893 LYPLA2O95372 231 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 TECP42680 631 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 COASYQ13057 564 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 PCBP1Q15365 356 aaKnown RBP eCLIP24.02■■□□□ 1.44
C9orf3-208ENST00000451893 ZNF174Q15697 407 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 LARP1BQ659C4 914 aaKnown RBP24.02■■□□□ 1.44
C9orf3-208ENST00000451893 HACE1Q8IYU2 909 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 SMRP1Q8NCR6 262 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 PIGOQ8TEQ8 1089 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 MSLNLQ96KJ4 702 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 HSD17B14Q9BPX1 270 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 LRFN3Q9BTN0 628 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 FOXP1Q9H334 677 aaPredicted RBP24.02■■□□□ 1.44
C9orf3-208ENST00000451893 RSAD1Q9HA92 442 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 CLEC1BQ9P126 229 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 CNTNAP2Q9UHC6 1331 aa24.02■■□□□ 1.44
C9orf3-208ENST00000451893 ZNF623O75123 536 aa24.01■■□□□ 1.43
C9orf3-208ENST00000451893 OR52Z1P0C646 297 aa24.01■■□□□ 1.43
C9orf3-208ENST00000451893 SYT1P21579 422 aa24.01■■□□□ 1.43
C9orf3-208ENST00000451893 AXLP30530 894 aa24.01■■□□□ 1.43
C9orf3-208ENST00000451893 TMEM132AQ24JP5 1023 aa24.01■■□□□ 1.43
C9orf3-208ENST00000451893 NOTUMQ6P988 496 aa24.01■■□□□ 1.43
C9orf3-208ENST00000451893 MAEAQ7L5Y9 396 aa24.01■■□□□ 1.43
C9orf3-208ENST00000451893 CNNM3Q8NE01 707 aa24.01■■□□□ 1.43
C9orf3-208ENST00000451893 MTMR9Q96QG7 549 aa24.01■■□□□ 1.43
C9orf3-208ENST00000451893 MINDY3Q9H8M7 445 aa24.01■■□□□ 1.43
C9orf3-208ENST00000451893 TBC1D13Q9NVG8 400 aa24.01■■□□□ 1.43
C9orf3-208ENST00000451893 KANSL3Q9P2N6 904 aa24.01■■□□□ 1.43
C9orf3-208ENST00000451893 USP15Q9Y4E8 981 aaPredicted RBP24.01■■□□□ 1.43
C9orf3-208ENST00000451893 SPDYE4A6NLX3 237 aa24■■□□□ 1.43
C9orf3-208ENST00000451893 WNT7AO00755 349 aa24■■□□□ 1.43
C9orf3-208ENST00000451893 EYA4O95677 639 aa24■■□□□ 1.43
C9orf3-208ENST00000451893 GLP2RO95838 553 aa24■■□□□ 1.43
C9orf3-208ENST00000451893 ITGA4P13612 1032 aa24■■□□□ 1.43
C9orf3-208ENST00000451893 ORC2Q13416 577 aaPredicted RBP24■■□□□ 1.43
C9orf3-208ENST00000451893 TTC38Q5R3I4 469 aa24■■□□□ 1.43
C9orf3-208ENST00000451893 CASP10Q92851 521 aa24■■□□□ 1.43
C9orf3-208ENST00000451893 POLR3FQ9H1D9 316 aaPredicted RBP24■■□□□ 1.43
C9orf3-208ENST00000451893 TMEM60Q9H2L4 133 aa24■■□□□ 1.43
C9orf3-208ENST00000451893 TUFT1Q9NNX1 390 aa24■■□□□ 1.43
C9orf3-208ENST00000451893 UBN1Q9NPG3 1134 aa24■■□□□ 1.43
C9orf3-208ENST00000451893 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.99■■□□□ 1.43
C9orf3-208ENST00000451893 LRRIQ4A6NIV6 560 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 HIDE1A8MVS5 230 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 GPR37L1O60883 481 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 OFD1O75665 1012 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 CXCL14O95715 111 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 PTMSP20962 102 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 RARRES1P49788 294 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 HAUS3Q68CZ6 603 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 VPS52Q8N1B4 723 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 CPB2Q96IY4 423 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 APOL6Q9BWW8 343 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 APOL5Q9BWW9 433 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 NRDE2Q9H7Z3 1164 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 XPNPEP1Q9NQW7 623 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 RAPGEFL1Q9UHV5 662 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 ATP6V1DQ9Y5K8 247 aa23.99■■□□□ 1.43
C9orf3-208ENST00000451893 MEIS3P2A8K0S8 358 aa23.98■■□□□ 1.43
C9orf3-208ENST00000451893 XRCC6P12956 609 aaKnown RBP eCLIP23.98■■□□□ 1.43
C9orf3-208ENST00000451893 PTENP60484 403 aa23.98■■□□□ 1.43
C9orf3-208ENST00000451893 RBM10P98175 930 aaKnown RBP23.98■■□□□ 1.43
C9orf3-208ENST00000451893 GIT2Q14161 759 aa23.98■■□□□ 1.43
C9orf3-208ENST00000451893 TPRNQ4KMQ1 711 aa23.98■■□□□ 1.43
C9orf3-208ENST00000451893 NOSTRINQ8IVI9 506 aa23.98■■□□□ 1.43
C9orf3-208ENST00000451893 ZBTB8OSQ8IWT0 167 aa23.98■■□□□ 1.43
C9orf3-208ENST00000451893 MCPH1Q8NEM0 835 aa23.98■■□□□ 1.43
C9orf3-208ENST00000451893 FBXO18Q8NFZ0 1043 aa23.98■■□□□ 1.43
C9orf3-208ENST00000451893 CCDC51Q96ER9 411 aa23.98■■□□□ 1.43
C9orf3-208ENST00000451893 NACC1Q96RE7 527 aa23.98■■□□□ 1.43
C9orf3-208ENST00000451893 ZDHHC9Q9Y397 364 aa23.98■■□□□ 1.43
C9orf3-208ENST00000451893 A0A087WWV3 80 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 ARHGEF35A5YM69 484 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 C19orf67A6NJJ6 358 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 POMCP01189 267 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 ZSCAN22P10073 491 aaPredicted RBP23.97■■□□□ 1.43
C9orf3-208ENST00000451893 CAPSQ13938 189 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 NFKBIBQ15653 356 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 CES5AQ6NT32 575 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 ANKRD54Q6NXT1 300 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 ASAP3Q8TDY4 903 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 IGSF21Q96ID5 467 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 RPGRIP1Q96KN7 1286 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 RAB34Q9BZG1 259 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 STK39Q9UEW8 545 aa23.97■■□□□ 1.43
C9orf3-208ENST00000451893 C2orf71A6NGG8 1288 aa23.96■■□□□ 1.43
C9orf3-208ENST00000451893 TSPAN1O60635 241 aa23.96■■□□□ 1.43
C9orf3-208ENST00000451893 NR1I2O75469 434 aa23.96■■□□□ 1.43
C9orf3-208ENST00000451893 ALDH2P05091 517 aa23.96■■□□□ 1.43
C9orf3-208ENST00000451893 GALTP07902 379 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms