RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 USP33Q8TEY7 942 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 DHX58Q96C10 678 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 CHMP4CQ96CF2 233 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 NOX5Q96PH1 765 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 PNKPQ96T60 521 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 RNF38Q9H0F5 515 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 TMPRSS5Q9H3S3 457 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 VIPAS39Q9H9C1 493 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 PDE11AQ9HCR9 933 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 CDC23Q9UJX2 597 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 HDAC5Q9UQL6 1122 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 RWDD3Q9Y3V2 267 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 DUSP10Q9Y6W6 482 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 KDM6AO15550 1401 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 ADAMTS13Q76LX8 1427 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 C4AP0C0L4 1744 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 C4BP0C0L5 1744 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 ACEP12821 1306 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 SH3TC1Q8TE82 1336 aa4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 PHRF1Q9P1Y6 1649 aaKnown RBP4.68□□□□□ -1.66
HMGB3P22-202ENST00000451823 PALLDQ8WX93 1383 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PI4KAP2A4QPH2 592 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 TMEM232C9JQI7 657 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 AURKAO14965 403 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 NOBOXO60393 691 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PPP6R2O75170 966 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZNF202O95125 648 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PMLP29590 882 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PDIA3P30101 505 aaKnown RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 RFX5P48382 616 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 LMAN1P49257 510 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 SARSP49591 514 aaKnown RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 UBASH3AP57075 661 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 RACK1P63244 317 aaKnown RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 DLX2Q07687 328 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 STK3Q13188 491 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PUM1Q14671 1186 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 SLC39A14Q15043 492 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PTPAQ15257 358 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 MCTP2Q6DN12 878 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 KSR2Q6VAB6 950 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 APTXQ7Z2E3 356 aaKnown RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 BRAPQ7Z569 592 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 B3GNT8Q7Z7M8 397 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 ARHGEF25Q86VW2 580 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 EFCAB13Q8IY85 973 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 CARFQ8N187 725 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 LZTR1Q8N653 840 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 CEP112Q8N8E3 955 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PI4KAP1Q8N8J0 262 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PPM1EQ8WY54 764 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 ERCC4Q92889 916 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 RNF34Q969K3 372 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 CCDC34Q96HJ3 373 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 SUCLG2Q96I99 432 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 FGD4Q96M96 766 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PANX2Q96RD6 677 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 BAG1Q99933 345 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 MRPL44Q9H9J2 332 aaKnown RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 MED4Q9NPJ6 270 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 A1CFQ9NQ94 594 aaKnown RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 SPATA6Q9NWH7 488 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PCDHB10Q9UN67 800 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PA2G4Q9UQ80 394 aaKnown RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PCDHGB7Q9Y5F8 929 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 BCL9LQ86UU0 1499 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 MROH7-TTC4A0A0A0MT08 1334 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 ATXN2Q99700 1313 aaKnown RBP4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 SPEF2Q9C093 1822 aa4.67□□□□□ -1.66
HMGB3P22-202ENST00000451823 PLEKHG1Q9ULL1 1385 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 NWD2Q9ULI1 1742 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 LOC102724159A0A0B4J2E5 919 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 A0A1B0GVL5 298 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 C2orf71A6NGG8 1288 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 K7ESM1 405 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 SPTLC2O15270 562 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 N4BP1O75113 896 aaKnown RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 WDHD1O75717 1129 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 EIF3JO75822 258 aaKnown RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 RAPGEF3O95398 923 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 SYF2O95926 243 aaKnown RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 TOP1P11387 765 aaKnown RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 PFKFB1P16118 471 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 CNR2P34972 360 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 TNNT3P45378 269 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 ME1P48163 572 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 EIF5P55010 431 aaKnown RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 GNG11P61952 73 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 AMPD2Q01433 879 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 CASP8Q14790 479 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 PWP2Q15269 919 aaKnown RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 WHAMMP3Q1A5X7 153 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 CT47A1Q5JQC4 288 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 EEF1DP3Q658K8 133 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 HEATR6Q6AI08 1181 aaKnown RBP4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 LEKR1Q6ZMV7 388 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 CCDC81Q6ZN84 652 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 TOGARAM2Q6ZUX3 1019 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 RASGRP2Q7LDG7 609 aa4.66□□□□□ -1.66
HMGB3P22-202ENST00000451823 TADA2BQ86TJ2 420 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms