RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 FAM47CQ5HY64 1035 aa21.13■□□□□ 0.97
RPS28-202ENST00000449223 SRGAP1Q7Z6B7 1085 aa21.13■□□□□ 0.97
RPS28-202ENST00000449223 FILIP1Q7Z7B0 1213 aa21.13■□□□□ 0.97
RPS28-202ENST00000449223 FAM114A1Q8IWE2 563 aa21.13■□□□□ 0.97
RPS28-202ENST00000449223 DNAJB3Q8WWF6 145 aa21.13■□□□□ 0.97
RPS28-202ENST00000449223 PRIMPOLQ96LW4 560 aa21.13■□□□□ 0.97
RPS28-202ENST00000449223 A0A087WZ62 844 aa21.12■□□□□ 0.97
RPS28-202ENST00000449223 ACKR2O00590 384 aa21.12■□□□□ 0.97
RPS28-202ENST00000449223 GNA14O95837 355 aa21.12■□□□□ 0.97
RPS28-202ENST00000449223 MNX1P50219 401 aaPredicted RBP21.12■□□□□ 0.97
RPS28-202ENST00000449223 ADAM9Q13443 819 aa21.12■□□□□ 0.97
RPS28-202ENST00000449223 SLC39A4Q6P5W5 647 aa21.12■□□□□ 0.97
RPS28-202ENST00000449223 FDXACB1Q9BRP7 624 aaPredicted RBP21.12■□□□□ 0.97
RPS28-202ENST00000449223 MKNK1Q9BUB5 465 aa21.12■□□□□ 0.97
RPS28-202ENST00000449223 FAM49AQ9H0Q0 323 aaPredicted RBP21.12■□□□□ 0.97
RPS28-202ENST00000449223 IKZF4Q9H2S9 585 aa21.12■□□□□ 0.97
RPS28-202ENST00000449223 PRMT7Q9NVM4 692 aaPredicted RBP21.12■□□□□ 0.97
RPS28-202ENST00000449223 ARVCFO00192 962 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 HNRNPDLO14979 420 aaKnown RBP21.11■□□□□ 0.97
RPS28-202ENST00000449223 CETN3O15182 167 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 SLC16A3O15427 465 aaKnown RBP21.11■□□□□ 0.97
RPS28-202ENST00000449223 GARTP22102 1010 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 ADSSP30520 456 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 GJA8P48165 433 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 CDK7P50613 346 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 PTK7Q13308 1070 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 PTGISQ16647 500 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 TCP11X2Q5H9J9 407 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 APTXQ7Z2E3 356 aaKnown RBP21.11■□□□□ 0.97
RPS28-202ENST00000449223 RSPH3Q86UC2 560 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 ANKLE1Q8NAG6 615 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 NLRP7Q8WX94 980 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 VTI1AQ96AJ9 217 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 MRPL4Q9BYD3 311 aaKnown RBP21.11■□□□□ 0.97
RPS28-202ENST00000449223 MINDY3Q9H8M7 445 aa21.11■□□□□ 0.97
RPS28-202ENST00000449223 LIMA1Q9UHB6 759 aaKnown RBP21.11■□□□□ 0.97
RPS28-202ENST00000449223 KCNJ18B7U540 433 aa21.1■□□□□ 0.97
RPS28-202ENST00000449223 AP5Z1O43299 807 aa21.1■□□□□ 0.97
RPS28-202ENST00000449223 CAND2O75155 1236 aa21.1■□□□□ 0.97
RPS28-202ENST00000449223 EDN1P05305 212 aa21.1■□□□□ 0.97
RPS28-202ENST00000449223 PRKCBP05771 671 aa21.1■□□□□ 0.97
RPS28-202ENST00000449223 KCNJ12Q14500 433 aa21.1■□□□□ 0.97
RPS28-202ENST00000449223 AMHR2Q16671 573 aa21.1■□□□□ 0.97
RPS28-202ENST00000449223 KIZQ2M2Z5 673 aa21.1■□□□□ 0.97
RPS28-202ENST00000449223 CNTNAP2Q9UHC6 1331 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 KIAA0391O15091 583 aaKnown RBP21.09■□□□□ 0.97
RPS28-202ENST00000449223 MAPK13O15264 365 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 MYCP01106 439 aaPredicted RBP21.09■□□□□ 0.97
RPS28-202ENST00000449223 IQCF3P0C7M6 154 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 CRYBB1P53674 252 aaPredicted RBP21.09■□□□□ 0.97
RPS28-202ENST00000449223 MCCD1P59942 119 aaPredicted RBP21.09■□□□□ 0.97
RPS28-202ENST00000449223 CNOT6LQ96LI5 555 aaKnown RBP21.09■□□□□ 0.97
RPS28-202ENST00000449223 GCOM2Q9BZD3 368 aaPredicted RBP21.09■□□□□ 0.97
RPS28-202ENST00000449223 INO80BQ9C086 356 aaPredicted RBP21.09■□□□□ 0.97
RPS28-202ENST00000449223 ANKRD63C9JTQ0 380 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 INO80B-WBP1J3KQ70 363 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 CLIC2O15247 247 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 COL6A1P12109 1028 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 DARSP14868 501 aaKnown RBP21.09■□□□□ 0.97
RPS28-202ENST00000449223 CDK11BP21127 795 aaKnown RBP21.09■□□□□ 0.97
RPS28-202ENST00000449223 PROZP22891 400 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 LIG4P49917 911 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 FANCCQ00597 558 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 SLFN12LQ6IEE8 588 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 TSHZ1Q6ZSZ6 1077 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 WNT8BQ93098 351 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 FBXL18Q96ME1 805 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 ACO2Q99798 780 aaKnown RBP21.09■□□□□ 0.97
RPS28-202ENST00000449223 CBWD1Q9BRT8 395 aa21.09■□□□□ 0.97
RPS28-202ENST00000449223 TISP43B9A030 160 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 TOM1L1O75674 476 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 AKAP3O75969 853 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 EIF4BP23588 611 aaKnown RBP21.08■□□□□ 0.96
RPS28-202ENST00000449223 MRPS6P82932 125 aaKnown RBP21.08■□□□□ 0.96
RPS28-202ENST00000449223 RBL2Q08999 1139 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 KRT31Q15323 416 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 TRIM71Q2Q1W2 868 aaKnown RBP21.08■□□□□ 0.96
RPS28-202ENST00000449223 C1orf53Q5VUE5 145 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 ARMCX5Q6P1M9 558 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 FRMD5Q7Z6J6 570 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 ANKRD20A12PQ8NF67 263 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 BICD1Q96G01 975 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 EEF2KMTQ96G04 330 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 TARS2Q9BW92 718 aaKnown RBP21.08■□□□□ 0.96
RPS28-202ENST00000449223 PTPRHQ9HD43 1115 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 TRMT13Q9NUP7 481 aaKnown RBP21.08■□□□□ 0.96
RPS28-202ENST00000449223 HSPBP1Q9NZL4 362 aa21.08■□□□□ 0.96
RPS28-202ENST00000449223 MAGEC2Q9UBF1 373 aaPredicted RBP21.08■□□□□ 0.96
RPS28-202ENST00000449223 ABLIM1O14639 778 aa21.07■□□□□ 0.96
RPS28-202ENST00000449223 MGAT3Q09327 533 aa21.07■□□□□ 0.96
RPS28-202ENST00000449223 SNX17Q15036 470 aa21.07■□□□□ 0.96
RPS28-202ENST00000449223 HSP90AA4PQ58FG1 418 aa21.07■□□□□ 0.96
RPS28-202ENST00000449223 XXYLT1Q8NBI6 393 aa21.07■□□□□ 0.96
RPS28-202ENST00000449223 DHX38Q92620 1227 aaKnown RBP21.07■□□□□ 0.96
RPS28-202ENST00000449223 BORCS6Q96GS4 357 aa21.07■□□□□ 0.96
RPS28-202ENST00000449223 ZNF668Q96K58 619 aaPredicted RBP21.07■□□□□ 0.96
RPS28-202ENST00000449223 SCLT1Q96NL6 688 aa21.07■□□□□ 0.96
RPS28-202ENST00000449223 CELF4Q9BZC1 486 aaKnown RBP21.07■□□□□ 0.96
RPS28-202ENST00000449223 CDHR5Q9HBB8 845 aa21.07■□□□□ 0.96
RPS28-202ENST00000449223 METTL14Q9HCE5 456 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms