RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 GBP3Q9H0R5 595 aa21.88■■□□□ 1.09
VCP-203ENST00000448530 POLR3FQ9H1D9 316 aaPredicted RBP21.88■■□□□ 1.09
VCP-203ENST00000448530 TBC1D13Q9NVG8 400 aa21.88■■□□□ 1.09
VCP-203ENST00000448530 CLEC1BQ9P126 229 aa21.88■■□□□ 1.09
VCP-203ENST00000448530 BARX2Q9UMQ3 279 aaPredicted RBP21.88■■□□□ 1.09
VCP-203ENST00000448530 MEIS3P2A8K0S8 358 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 NT5C1B-RDH14C9J2C7 533 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 MED24O75448 989 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 GLP2RO95838 553 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 ARL2P36404 184 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 COASYQ13057 564 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 CAPSQ13938 189 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 HAUS3Q68CZ6 603 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 MRPL10Q7Z7H8 261 aaKnown RBP21.87■■□□□ 1.09
VCP-203ENST00000448530 IFNLR1Q8IU57 520 aaPredicted RBP21.87■■□□□ 1.09
VCP-203ENST00000448530 TMEM87AQ8NBN3 555 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 MCPH1Q8NEM0 835 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 FAM193BQ96PV7 902 aaPredicted RBP21.87■■□□□ 1.09
VCP-203ENST00000448530 RSAD1Q9HA92 442 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 UBN1Q9NPG3 1134 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 KANSL3Q9P2N6 904 aa21.87■■□□□ 1.09
VCP-203ENST00000448530 DBR1Q9UK59 544 aaKnown RBP21.87■■□□□ 1.09
VCP-203ENST00000448530 ARHGEF35A5YM69 484 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 TSPAN1O60635 241 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 EYA4O95677 639 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 ITGA4P13612 1032 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 GLRA2P23416 452 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 RPA1P27694 616 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 UBXN11Q5T124 520 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 POTEGQ6S5H5 508 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 AGMOQ6ZNB7 445 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 MAEAQ7L5Y9 396 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 SMRP1Q8NCR6 262 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 KHSRPQ92945 711 aaKnown RBP eCLIP21.86■■□□□ 1.09
VCP-203ENST00000448530 RAB34Q9BZG1 259 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 TRIM6Q9C030 488 aaPredicted RBP21.86■■□□□ 1.09
VCP-203ENST00000448530 NRDE2Q9H7Z3 1164 aa21.86■■□□□ 1.09
VCP-203ENST00000448530 LRRIQ4A6NIV6 560 aa21.85■■□□□ 1.09
VCP-203ENST00000448530 HIDE1A8MVS5 230 aa21.85■■□□□ 1.09
VCP-203ENST00000448530 PI4K2BG5E9Z4 385 aa21.85■■□□□ 1.09
VCP-203ENST00000448530 ALADP13716 330 aa21.85■■□□□ 1.09
VCP-203ENST00000448530 NCLP19338 710 aaKnown RBP21.85■■□□□ 1.09
VCP-203ENST00000448530 COL9A1P20849 921 aa21.85■■□□□ 1.09
VCP-203ENST00000448530 U2AF2P26368 475 aaKnown RBP eCLIP21.85■■□□□ 1.092e-6■□□□□ 10.7
VCP-203ENST00000448530 MBTD1Q05BQ5 628 aa21.85■■□□□ 1.09
VCP-203ENST00000448530 TMEM31Q5JXX7 168 aa21.85■■□□□ 1.09
VCP-203ENST00000448530 HACE1Q8IYU2 909 aa21.85■■□□□ 1.09
VCP-203ENST00000448530 CPB2Q96IY4 423 aa21.85■■□□□ 1.09
VCP-203ENST00000448530 NFKBIZQ9BYH8 718 aa21.85■■□□□ 1.09
VCP-203ENST00000448530 GALTP07902 379 aa21.84■■□□□ 1.09
VCP-203ENST00000448530 MUTP22033 750 aa21.84■■□□□ 1.09
VCP-203ENST00000448530 CCT6AP40227 531 aaKnown RBP21.84■■□□□ 1.09
VCP-203ENST00000448530 NBR1Q14596 966 aa21.84■■□□□ 1.09
VCP-203ENST00000448530 MCTP1Q6DN14 999 aa21.84■■□□□ 1.09
VCP-203ENST00000448530 LLGL2Q6P1M3 1020 aa21.84■■□□□ 1.09
VCP-203ENST00000448530 VPS52Q8N1B4 723 aa21.84■■□□□ 1.09
VCP-203ENST00000448530 MRPL43Q8N983 215 aaKnown RBP21.84■■□□□ 1.09
VCP-203ENST00000448530 IGSF21Q96ID5 467 aa21.84■■□□□ 1.09
VCP-203ENST00000448530 CSRNP2Q9H175 543 aa21.84■■□□□ 1.09
VCP-203ENST00000448530 LRWD1Q9UFC0 647 aa21.84■■□□□ 1.09
VCP-203ENST00000448530 STK24Q9Y6E0 443 aa21.84■■□□□ 1.09
VCP-203ENST00000448530 C19orf67A6NJJ6 358 aa21.83■■□□□ 1.09
VCP-203ENST00000448530 CXCL14O95715 111 aa21.83■■□□□ 1.09
VCP-203ENST00000448530 MCM2P49736 904 aa21.83■■□□□ 1.09
VCP-203ENST00000448530 FXR2P51116 673 aaKnown RBP eCLIP21.83■■□□□ 1.098e-7■■■□□ 16.8
VCP-203ENST00000448530 RBM10P98175 930 aaKnown RBP21.83■■□□□ 1.09
VCP-203ENST00000448530 PADI6Q6TGC4 694 aa21.83■■□□□ 1.09
VCP-203ENST00000448530 DDX53Q86TM3 631 aaKnown RBP21.83■■□□□ 1.09
VCP-203ENST00000448530 ZBTB8OSQ8IWT0 167 aa21.83■■□□□ 1.09
VCP-203ENST00000448530 TMX3Q96JJ7 454 aa21.83■■□□□ 1.09
VCP-203ENST00000448530 EIF2AQ9BY44 585 aaKnown RBP21.83■■□□□ 1.09
VCP-203ENST00000448530 GPRC5CQ9NQ84 441 aa21.83■■□□□ 1.09
VCP-203ENST00000448530 DNAJB4Q9UDY4 337 aa21.83■■□□□ 1.09
VCP-203ENST00000448530 STK39Q9UEW8 545 aa21.83■■□□□ 1.09
VCP-203ENST00000448530 USP15Q9Y4E8 981 aaPredicted RBP21.83■■□□□ 1.09
VCP-203ENST00000448530 IPPQ9Y573 584 aa21.83■■□□□ 1.09
VCP-203ENST00000448530 C2orf71A6NGG8 1288 aa21.82■■□□□ 1.08
VCP-203ENST00000448530 POMCP01189 267 aa21.82■■□□□ 1.08
VCP-203ENST00000448530 ALDH2P05091 517 aa21.82■■□□□ 1.08
VCP-203ENST00000448530 ARF4P18085 180 aaPredicted RBP21.82■■□□□ 1.08
VCP-203ENST00000448530 SLC11A1P49279 550 aa21.82■■□□□ 1.08
VCP-203ENST00000448530 PTGDRQ13258 359 aa21.82■■□□□ 1.08
VCP-203ENST00000448530 TMEM184AQ6ZMB5 413 aa21.82■■□□□ 1.08
VCP-203ENST00000448530 ZNF280BQ86YH2 543 aa21.82■■□□□ 1.08
VCP-203ENST00000448530 SMG8Q8ND04 991 aaKnown RBP21.82■■□□□ 1.08
VCP-203ENST00000448530 VN1R2Q8NFZ6 395 aa21.82■■□□□ 1.08
VCP-203ENST00000448530 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.81■■□□□ 1.08
VCP-203ENST00000448530 H3BQV1 296 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 LAD1O00515 517 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 DCXO43602 365 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 CYP11B2P19099 503 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 GIT2Q14161 759 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 PDIA5Q14554 519 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 AMHR2Q16671 573 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 TMEM132AQ24JP5 1023 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 ANKRD54Q6NXT1 300 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 SLC27A1Q6PCB7 646 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 TMEM173Q86WV6 379 aaPredicted RBP21.81■■□□□ 1.08
VCP-203ENST00000448530 C4orf32Q8N8J7 132 aa21.81■■□□□ 1.08
VCP-203ENST00000448530 CASP10Q92851 521 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms