RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 NAALADL2Q58DX5 795 aa27.75■■■□□ 2.03
HTATSF1-203ENST00000448450 TWF2Q6IBS0 349 aaKnown RBP27.75■■■□□ 2.03
HTATSF1-203ENST00000448450 ECHDC2Q86YB7 292 aa27.75■■■□□ 2.03
HTATSF1-203ENST00000448450 CHST12Q9NRB3 414 aa27.75■■■□□ 2.03
HTATSF1-203ENST00000448450 DACT1Q9NYF0 836 aa27.75■■■□□ 2.03
HTATSF1-203ENST00000448450 MRPL42Q9Y6G3 142 aaKnown RBP27.75■■■□□ 2.03
HTATSF1-203ENST00000448450 TBKBP1A7MCY6 615 aa27.74■■■□□ 2.03
HTATSF1-203ENST00000448450 FGFR1P11362 822 aa27.74■■■□□ 2.03
HTATSF1-203ENST00000448450 KCNK18Q7Z418 384 aa27.74■■■□□ 2.03
HTATSF1-203ENST00000448450 PNMA5Q96PV4 448 aa27.74■■■□□ 2.03
HTATSF1-203ENST00000448450 ZSCAN16Q9H4T2 348 aaPredicted RBP27.74■■■□□ 2.03
HTATSF1-203ENST00000448450 LRRIQ4A6NIV6 560 aa27.73■■■□□ 2.03
HTATSF1-203ENST00000448450 INO80B-WBP1J3KQ70 363 aa27.73■■■□□ 2.03
HTATSF1-203ENST00000448450 LINC01565O15544 149 aa27.73■■■□□ 2.03
HTATSF1-203ENST00000448450 EYA4O95677 639 aa27.73■■■□□ 2.03
HTATSF1-203ENST00000448450 MARCKSP29966 332 aaPredicted RBP27.73■■■□□ 2.03
HTATSF1-203ENST00000448450 HERC4Q5GLZ8 1057 aaPredicted RBP27.73■■■□□ 2.03
HTATSF1-203ENST00000448450 CABP7Q86V35 215 aa27.73■■■□□ 2.03
HTATSF1-203ENST00000448450 CDK5RAP3Q96JB5 506 aa27.73■■■□□ 2.03
HTATSF1-203ENST00000448450 ELAC1Q9H777 363 aaKnown RBP27.73■■■□□ 2.03
HTATSF1-203ENST00000448450 MUTYHQ9UIF7 546 aa27.73■■■□□ 2.03
HTATSF1-203ENST00000448450 A0A0U1RQF3 1178 aa27.72■■■□□ 2.03
HTATSF1-203ENST00000448450 NHLH1Q02575 133 aa27.72■■■□□ 2.03
HTATSF1-203ENST00000448450 ADAM15Q13444 863 aa27.72■■■□□ 2.03
HTATSF1-203ENST00000448450 CAMK1Q14012 370 aa27.72■■■□□ 2.03
HTATSF1-203ENST00000448450 PTPAQ15257 358 aa27.72■■■□□ 2.03
HTATSF1-203ENST00000448450 LONRF3Q496Y0 759 aa27.72■■■□□ 2.03
HTATSF1-203ENST00000448450 HFE2Q6ZVN8 426 aa27.72■■■□□ 2.03
HTATSF1-203ENST00000448450 AGPAT5Q9NUQ2 364 aa27.72■■■□□ 2.03
HTATSF1-203ENST00000448450 ERLIN2O94905 339 aa27.71■■■□□ 2.03
HTATSF1-203ENST00000448450 SSBP05455 408 aaKnown RBP eCLIP27.71■■■□□ 2.03
HTATSF1-203ENST00000448450 ITGB1P05556 798 aa27.71■■■□□ 2.03
HTATSF1-203ENST00000448450 UBA7P41226 1012 aa27.71■■■□□ 2.03
HTATSF1-203ENST00000448450 RNF135Q8IUD6 432 aa27.71■■■□□ 2.03
HTATSF1-203ENST00000448450 BSNDQ8WZ55 320 aa27.71■■■□□ 2.03
HTATSF1-203ENST00000448450 AK8Q96MA6 479 aa27.71■■■□□ 2.03
HTATSF1-203ENST00000448450 MFSD14AQ96MC6 490 aa27.71■■■□□ 2.03
HTATSF1-203ENST00000448450 FBXL18Q96ME1 805 aa27.71■■■□□ 2.03
HTATSF1-203ENST00000448450 USP28Q96RU2 1077 aa27.71■■■□□ 2.03
HTATSF1-203ENST00000448450 FNDC1Q4ZHG4 1894 aaPredicted RBP27.7■■■□□ 2.03
HTATSF1-203ENST00000448450 MRE11P49959 708 aa27.7■■■□□ 2.02
HTATSF1-203ENST00000448450 MBTD1Q05BQ5 628 aa27.7■■■□□ 2.02
HTATSF1-203ENST00000448450 POU5F1BQ06416 359 aa27.7■■■□□ 2.02
HTATSF1-203ENST00000448450 HYIQ5T013 277 aa27.7■■■□□ 2.02
HTATSF1-203ENST00000448450 KLHL23Q8NBE8 558 aa27.7■■■□□ 2.02
HTATSF1-203ENST00000448450 SPPL3Q8TCT6 385 aa27.7■■■□□ 2.02
HTATSF1-203ENST00000448450 RNF19AQ9NV58 838 aa27.7■■■□□ 2.02
HTATSF1-203ENST00000448450 DNAJB1P25685 340 aa27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 HOXA11P31270 313 aaPredicted RBP27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 LONP1P36776 959 aaKnown RBP27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 SPECC1Q5M775 1068 aa27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 SPOUT1Q5T280 376 aaKnown RBP27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 ZNF598Q86UK7 904 aaKnown RBP27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 IFNLR1Q8IU57 520 aaPredicted RBP27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 EFHBQ8N7U6 833 aa27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 LPPQ93052 612 aa27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 CPB2Q96IY4 423 aa27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 MSLNLQ96KJ4 702 aa27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 RUSC1Q9BVN2 902 aa27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 NT5C3AQ9H0P0 336 aa27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 FAM105AQ9NUU6 356 aa27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 PLXNA4Q9HCM2 1894 aa27.69■■■□□ 2.02
HTATSF1-203ENST00000448450 TSPAN1O60635 241 aa27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 EOMESO95936 686 aa27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 ATF7P17544 494 aaPredicted RBP27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 FOXD4L6Q3SYB3 417 aaPredicted RBP27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 RINT1Q6NUQ1 792 aa27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 FOXD4L3Q6VB84 417 aaPredicted RBP27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 ABI1Q8IZP0 508 aa27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 POF1BQ8WVV4 589 aa27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 CALML4Q96GE6 196 aa27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 CASD1Q96PB1 797 aa27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 CSRNP2Q9H175 543 aa27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 TFIP11Q9UBB9 837 aaKnown RBP27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 HCSTQ9UBK5 93 aa27.68■■■□□ 2.02
HTATSF1-203ENST00000448450 TECTAO75443 2155 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 HOXA2O43364 376 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 ZSCAN22P10073 491 aaPredicted RBP27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 NCBP1Q09161 790 aaKnown RBP27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 TMEM119Q4V9L6 283 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 CLLU1OSQ5K130 101 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 ADGRD2Q7Z7M1 963 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 SMRP1Q8NCR6 262 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 RASSF8Q8NHQ8 419 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 HELQQ8TDG4 1101 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 IFT74Q96LB3 600 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 CLIC6Q96NY7 704 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 TRAIPQ9BWF2 469 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 NFKBIZQ9BYH8 718 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 TMEM117Q9H0C3 514 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 TYW1Q9NV66 732 aaKnown RBP27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 FBXO2Q9UK22 296 aaPredicted RBP27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 PCDHB2Q9Y5E7 798 aa27.67■■■□□ 2.02
HTATSF1-203ENST00000448450 PLA2G4BP0C869 781 aa27.66■■■□□ 2.02
HTATSF1-203ENST00000448450 LIG1P18858 919 aa27.66■■■□□ 2.02
HTATSF1-203ENST00000448450 NRIP1P48552 1158 aa27.66■■■□□ 2.02
HTATSF1-203ENST00000448450 RAD51AP2Q09MP3 1159 aa27.66■■■□□ 2.02
HTATSF1-203ENST00000448450 PKP1Q13835 747 aa27.66■■■□□ 2.02
HTATSF1-203ENST00000448450 KARSQ15046 597 aaKnown RBP27.66■■■□□ 2.02
HTATSF1-203ENST00000448450 C1orf186Q6ZWK4 172 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms