RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 TCP11Q8WWU5 503 aa31.56■■■□□ 2.64
CBX4-202ENST00000448310 MTRQ99707 1265 aa31.56■■■□□ 2.64
CBX4-202ENST00000448310 XPNPEP1Q9NQW7 623 aa31.56■■■□□ 2.64
CBX4-202ENST00000448310 MYO10Q9HD67 2058 aa31.55■■■□□ 2.64
CBX4-202ENST00000448310 WNT7AO00755 349 aa31.55■■■□□ 2.64
CBX4-202ENST00000448310 JAK2O60674 1132 aa31.55■■■□□ 2.64
CBX4-202ENST00000448310 SLITRK3O94933 977 aa31.55■■■□□ 2.64
CBX4-202ENST00000448310 CTSAP10619 480 aa31.55■■■□□ 2.64
CBX4-202ENST00000448310 MRPL10Q7Z7H8 261 aaKnown RBP31.55■■■□□ 2.64
CBX4-202ENST00000448310 NSUN7Q8NE18 718 aaKnown RBP31.55■■■□□ 2.64
CBX4-202ENST00000448310 URGCPQ8TCY9 931 aa31.55■■■□□ 2.64
CBX4-202ENST00000448310 PBXIP1Q96AQ6 731 aa31.55■■■□□ 2.64
CBX4-202ENST00000448310 EIF2AK1Q9BQI3 630 aaKnown RBP31.55■■■□□ 2.64
CBX4-202ENST00000448310 VN1R3Q9BXE9 311 aa31.55■■■□□ 2.64
CBX4-202ENST00000448310 RSAD1Q9HA92 442 aa31.55■■■□□ 2.64
CBX4-202ENST00000448310 TSHZ2Q9NRE2 1034 aa31.55■■■□□ 2.64
CBX4-202ENST00000448310 BTBD18B2RXH4 712 aa31.54■■■□□ 2.64
CBX4-202ENST00000448310 GAS2O43903 313 aaKnown RBP31.54■■■□□ 2.64
CBX4-202ENST00000448310 DDHD2O94830 711 aa31.54■■■□□ 2.64
CBX4-202ENST00000448310 WEE2P0C1S8 567 aa31.54■■■□□ 2.64
CBX4-202ENST00000448310 KANK3Q6NY19 840 aa31.54■■■□□ 2.64
CBX4-202ENST00000448310 BMP8AQ7Z5Y6 402 aa31.54■■■□□ 2.64
CBX4-202ENST00000448310 ALYREFQ86V81 257 aaKnown RBP31.54■■■□□ 2.64
CBX4-202ENST00000448310 C12orf76Q8N812 135 aaPredicted RBP31.54■■■□□ 2.64
CBX4-202ENST00000448310 TMEM87AQ8NBN3 555 aa31.54■■■□□ 2.64
CBX4-202ENST00000448310 ADAM7Q9H2U9 754 aa31.54■■■□□ 2.64
CBX4-202ENST00000448310 POMKQ9H5K3 350 aa31.54■■■□□ 2.64
CBX4-202ENST00000448310 ZDBF2Q9HCK1 2354 aa31.54■■■□□ 2.64
CBX4-202ENST00000448310 ASAP2O43150 1006 aa31.53■■■□□ 2.64
CBX4-202ENST00000448310 EPCAMP16422 314 aa31.53■■■□□ 2.64
CBX4-202ENST00000448310 NHLH1Q02575 133 aa31.53■■■□□ 2.64
CBX4-202ENST00000448310 CALCRLQ16602 461 aa31.53■■■□□ 2.64
CBX4-202ENST00000448310 RARS2Q5T160 578 aaKnown RBP31.53■■■□□ 2.64
CBX4-202ENST00000448310 CES5AQ6NT32 575 aa31.53■■■□□ 2.64
CBX4-202ENST00000448310 PPP4R2Q9NY27 417 aa31.53■■■□□ 2.64
CBX4-202ENST00000448310 PCDHA12Q9UN75 941 aa31.53■■■□□ 2.64
CBX4-202ENST00000448310 PTPN21Q16825 1174 aa31.52■■■□□ 2.64
CBX4-202ENST00000448310 DIS3L2Q8IYB7 885 aaKnown RBP31.52■■■□□ 2.64
CBX4-202ENST00000448310 KCNH6Q9H252 994 aa31.52■■■□□ 2.64
CBX4-202ENST00000448310 IRAK3Q9Y616 596 aa31.52■■■□□ 2.64
CBX4-202ENST00000448310 KMT2EQ8IZD2 1858 aa31.51■■■□□ 2.63
CBX4-202ENST00000448310 CARNS1A5YM72 827 aa31.51■■■□□ 2.63
CBX4-202ENST00000448310 ERLIN2O94905 339 aa31.51■■■□□ 2.63
CBX4-202ENST00000448310 POMCP01189 267 aa31.51■■■□□ 2.63
CBX4-202ENST00000448310 ITIH3Q06033 890 aa31.51■■■□□ 2.63
CBX4-202ENST00000448310 SIGLEC14Q08ET2 396 aa31.51■■■□□ 2.63
CBX4-202ENST00000448310 SMG8Q8ND04 991 aaKnown RBP31.51■■■□□ 2.63
CBX4-202ENST00000448310 HSD17B14Q9BPX1 270 aa31.51■■■□□ 2.63
CBX4-202ENST00000448310 EIF2AQ9BY44 585 aaKnown RBP31.51■■■□□ 2.63
CBX4-202ENST00000448310 TTC12Q9H892 705 aaPredicted RBP31.51■■■□□ 2.63
CBX4-202ENST00000448310 CNTNAP2Q9UHC6 1331 aa31.5■■■□□ 2.63
CBX4-202ENST00000448310 TDRD15B5MCY1 1934 aaKnown RBP31.5■■■□□ 2.63
CBX4-202ENST00000448310 TSPAN1O60635 241 aa31.5■■■□□ 2.63
CBX4-202ENST00000448310 SSBP05455 408 aaKnown RBP eCLIP31.5■■■□□ 2.63
CBX4-202ENST00000448310 TXKP42681 527 aa31.5■■■□□ 2.63
CBX4-202ENST00000448310 NEK4P51957 841 aa31.5■■■□□ 2.63
CBX4-202ENST00000448310 PTPN14Q15678 1187 aa31.5■■■□□ 2.63
CBX4-202ENST00000448310 ZBTB33Q86T24 672 aa31.5■■■□□ 2.63
CBX4-202ENST00000448310 FEZF2Q8TBJ5 459 aa31.5■■■□□ 2.63
CBX4-202ENST00000448310 ASAP3Q8TDY4 903 aa31.5■■■□□ 2.63
CBX4-202ENST00000448310 SLC22A17Q8WUG5 538 aa31.5■■■□□ 2.63
CBX4-202ENST00000448310 CPB2Q96IY4 423 aa31.5■■■□□ 2.63
CBX4-202ENST00000448310 FAM193BQ96PV7 902 aaPredicted RBP31.5■■■□□ 2.63
CBX4-202ENST00000448310 NR2E1Q9Y466 385 aa31.5■■■□□ 2.63
CBX4-202ENST00000448310 A0A087WWV3 80 aa31.49■■■□□ 2.63
CBX4-202ENST00000448310 NEMFO60524 1076 aa31.49■■■□□ 2.63
CBX4-202ENST00000448310 NCLP19338 710 aaKnown RBP31.49■■■□□ 2.63
CBX4-202ENST00000448310 PTENP60484 403 aa31.49■■■□□ 2.63
CBX4-202ENST00000448310 GIT2Q14161 759 aa31.49■■■□□ 2.63
CBX4-202ENST00000448310 NECTIN4Q96NY8 510 aa31.49■■■□□ 2.63
CBX4-202ENST00000448310 IPPQ9Y573 584 aa31.49■■■□□ 2.63
CBX4-202ENST00000448310 C2CD4DB7Z1M9 353 aa31.48■■■□□ 2.63
CBX4-202ENST00000448310 INO80B-WBP1J3KQ70 363 aa31.48■■■□□ 2.63
CBX4-202ENST00000448310 LYPLA2O95372 231 aa31.48■■■□□ 2.63
CBX4-202ENST00000448310 ITGA4P13612 1032 aa31.48■■■□□ 2.63
CBX4-202ENST00000448310 ST3GAL1Q11201 340 aa31.48■■■□□ 2.63
CBX4-202ENST00000448310 MXD4Q14582 209 aaPredicted RBP31.48■■■□□ 2.63
CBX4-202ENST00000448310 IER5LQ5T953 404 aa31.48■■■□□ 2.63
CBX4-202ENST00000448310 SUGP1Q8IWZ8 645 aaKnown RBP31.48■■■□□ 2.63
CBX4-202ENST00000448310 ASIC4Q96FT7 647 aa31.48■■■□□ 2.63
CBX4-202ENST00000448310 RNF39Q9H2S5 420 aa31.48■■■□□ 2.63
CBX4-202ENST00000448310 DZANK1Q9NVP4 752 aa31.48■■■□□ 2.63
CBX4-202ENST00000448310 FAN1Q9Y2M0 1017 aa31.48■■■□□ 2.63
CBX4-202ENST00000448310 HES2Q9Y543 173 aa31.48■■■□□ 2.63
CBX4-202ENST00000448310 NRP1O14786 923 aa31.47■■■□□ 2.63
CBX4-202ENST00000448310 MTHFRP42898 656 aa31.47■■■□□ 2.63
CBX4-202ENST00000448310 CAPSQ13938 189 aa31.47■■■□□ 2.63
CBX4-202ENST00000448310 TRIM29Q14134 588 aa31.47■■■□□ 2.63
CBX4-202ENST00000448310 PIGOQ8TEQ8 1089 aa31.47■■■□□ 2.63
CBX4-202ENST00000448310 RIPOR3Q96MK2 946 aa31.47■■■□□ 2.63
CBX4-202ENST00000448310 CCDC43Q96MW1 224 aaKnown RBP31.47■■■□□ 2.63
CBX4-202ENST00000448310 TMEM175Q9BSA9 504 aa31.47■■■□□ 2.63
CBX4-202ENST00000448310 ANKEF1Q9NU02 776 aa31.47■■■□□ 2.63
CBX4-202ENST00000448310 KANSL3Q9P2N6 904 aa31.47■■■□□ 2.63
CBX4-202ENST00000448310 POTEMA6NI47 508 aa31.46■■■□□ 2.63
CBX4-202ENST00000448310 DGAT1O75907 488 aa31.46■■■□□ 2.63
CBX4-202ENST00000448310 ALDH2P05091 517 aa31.46■■■□□ 2.63
CBX4-202ENST00000448310 MBTD1Q05BQ5 628 aa31.46■■■□□ 2.63
CBX4-202ENST00000448310 TFDP1Q14186 410 aa31.46■■■□□ 2.63
CBX4-202ENST00000448310 FBXL6Q8N531 539 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms