RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 SLC12A3P55017 1021 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 KARSQ15046 597 aaKnown RBP11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 PTPROQ16827 1216 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 FAM187BQ17R55 369 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 NAALADL2Q58DX5 795 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 SPECC1Q5M775 1068 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 DAW1Q8N136 415 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 KLHL23Q8NBE8 558 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 RASSF8Q8NHQ8 419 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 LRRC15Q8TF66 581 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 P2RX5Q93086 422 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 PGBD4Q96DM1 585 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 MRPL38Q96DV4 380 aaKnown RBP11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 CCDC51Q96ER9 411 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 EPSTI1Q96J88 318 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 ZNF396Q96N95 335 aaPredicted RBP11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 EIF2AQ9BY44 585 aaKnown RBP11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 CCSER1Q9C0I3 900 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 ALG13Q9NP73 1137 aaKnown RBP11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 PRDM6Q9NQX0 595 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 AAASQ9NRG9 546 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 PLAGL2Q9UPG8 496 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 PCDHB12Q9Y5F1 795 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 RALGAPA2Q2PPJ7 1873 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 NLRC5Q86WI3 1866 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 TTLL13PA6NNM8 815 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 CCDC169A6NNP5 214 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 ACKR2O00590 384 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 OFD1O75665 1012 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 F13A1P00488 732 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 ITGB1P05556 798 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 LIG1P18858 919 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 PLCG1P19174 1290 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 NCLP19338 710 aaKnown RBP11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 PEX3P56589 373 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 RAD51AP2Q09MP3 1159 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 PKP1Q13835 747 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 DHX8Q14562 1220 aaKnown RBP11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 STK38Q15208 465 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 SKIV2LQ15477 1246 aaKnown RBP11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 MAPK6Q16659 721 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 FOXD4L6Q3SYB3 417 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 ARSHQ5FYA8 562 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 GLB1LQ6UWU2 654 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 FOXD4L3Q6VB84 417 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 AGMOQ6ZNB7 445 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 CDR2LQ86X02 465 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 KRI1Q8N9T8 703 aaKnown RBP11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 COLGALT1Q8NBJ5 622 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 LINC00301Q8NCQ3 95 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 SMG8Q8ND04 991 aaKnown RBP11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 CNNM3Q8NE01 707 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 SPPL3Q8TCT6 385 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 PRIMPOLQ96LW4 560 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 DRC1Q96MC2 740 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 KIFC3Q9BVG8 833 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 TIPINQ9BVW5 301 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 BLOC1S4Q9NUP1 217 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 INPP5FQ9Y2H2 1132 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 USP20Q9Y2K6 914 aa11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 MORC2Q9Y6X9 1032 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL-207ENST00000447745 UNC80Q8N2C7 3258 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 NPHP3-ACAD11A0A0J9YXS1 232 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 K7ERI5 159 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 SPTLC2O15270 562 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 NPTXRO95502 500 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 PRKCBP05771 671 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 ITGA4P13612 1032 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 LAG3P18627 525 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 DNAJB1P25685 340 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 DDIT3P35638 169 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 NPTX2P47972 431 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 AFF1P51825 1210 aaKnown RBP11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 EFNA5P52803 228 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 MAPK7Q13164 816 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 PRPF4BQ13523 1007 aaKnown RBP11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 CAMK1Q14012 370 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 MCM6Q14566 821 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 NOMO2Q5JPE7 1267 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 SLC27A1Q6PCB7 646 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 KCNT2Q6UVM3 1135 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 LRRC43Q8N309 656 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 RAD54LQ92698 747 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 SYMPKQ92797 1274 aaKnown RBP11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 NTPCRQ9BSD7 190 aaKnown RBP11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 MRPL9Q9BYD2 267 aaKnown RBP11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 PANK2Q9BZ23 570 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 TRIM6Q9C030 488 aaPredicted RBP11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 CCDC113Q9H0I3 377 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 LMAN2LQ9H0V9 348 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 RSAD1Q9HA92 442 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 C17orf75Q9HAS0 396 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 UBN1Q9NPG3 1134 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 KMT5AQ9NQR1 393 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 KCND2Q9NZV8 630 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 CCDC39Q9UFE4 941 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 HES2Q9Y543 173 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 IPPQ9Y573 584 aa11.17□□□□□ -0.62
CTDSPL-207ENST00000447745 COL4A4P53420 1690 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms