RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 PDCD11Q14690 1871 aaKnown RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 A0A0U1RQF3 1178 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 MEIS3P2A8K0S8 358 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 SLC16A4O15374 487 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 TBCAO75347 108 aaKnown RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 FAM13AO94988 1023 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 EDN1P05305 212 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 ARF4P18085 180 aaPredicted RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 HOXA11P31270 313 aaPredicted RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 DDIT3P35638 169 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 NUCB2P80303 420 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 NCBP1Q09161 790 aaKnown RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 PRPF4BQ13523 1007 aaKnown RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 MAPK6Q16659 721 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 UBXN11Q5T124 520 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 NOTUMQ6P988 496 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 DYMQ7RTS9 669 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 CMTR2Q8IYT2 770 aaKnown RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 ABI1Q8IZP0 508 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 HELQQ8TDG4 1101 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 LEO1Q8WVC0 666 aaPredicted RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 DHX58Q96C10 678 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 ZNF689Q96CS4 500 aaPredicted RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 TGS1Q96RS0 853 aaKnown RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 TIPINQ9BVW5 301 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 APOL6Q9BWW8 343 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 EIF2AQ9BY44 585 aaKnown RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 CCDC113Q9H0I3 377 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 PRMT7Q9NVM4 692 aaPredicted RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 KCND2Q9NZV8 630 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 RCOR1Q9UKL0 485 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 PCDHB2Q9Y5E7 798 aa13.15□□□□□ -0.3
RFC4-208ENST00000447345 MRPL42Q9Y6G3 142 aaKnown RBP13.15□□□□□ -0.3
RFC4-208ENST00000447345 PHLPP2Q6ZVD8 1323 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 CNTNAP2Q9UHC6 1331 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 CSPG5O95196 566 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 NPTXRO95502 500 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 PLS3P13797 630 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 FOSL2P15408 326 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 CTNNB1P35222 781 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 RAB27AP51159 221 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 FAM189BP81408 668 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 CLLU1OSQ5K130 101 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 SPOUT1Q5T280 376 aaKnown RBP13.14□□□□□ -0.31
RFC4-208ENST00000447345 STAMQ92783 540 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 GAS2L1Q99501 681 aaPredicted RBP13.14□□□□□ -0.31
RFC4-208ENST00000447345 TRIM6Q9C030 488 aaPredicted RBP13.14□□□□□ -0.31
RFC4-208ENST00000447345 ELAC1Q9H777 363 aaKnown RBP13.14□□□□□ -0.31
RFC4-208ENST00000447345 RNF19AQ9NV58 838 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
RFC4-208ENST00000447345 ODF2LQ9ULJ1 636 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 INPP5FQ9Y2H2 1132 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 HES2Q9Y543 173 aa13.14□□□□□ -0.31
RFC4-208ENST00000447345 PRRC2BQ5JSZ5 2229 aaKnown RBP13.13□□□□□ -0.31
RFC4-208ENST00000447345 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.13□□□□□ -0.31
RFC4-208ENST00000447345 MYMKA6NI61 221 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 K7ENM7 598 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 K7ERI5 159 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 SKIP12755 728 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 IGFBP4P22692 258 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 AXLP30530 894 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 EFNA5P52803 228 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 ERVK-21P61565 698 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 GIT2Q14161 759 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 PCBP1Q15365 356 aaKnown RBP eCLIP13.13□□□□□ -0.31
RFC4-208ENST00000447345 EPC2Q52LR7 807 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 RESP18Q5W5W9 173 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 FAM43BQ6ZT52 329 aaPredicted RBP13.13□□□□□ -0.31
RFC4-208ENST00000447345 SV2BQ7L1I2 683 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 ZNF598Q86UK7 904 aaKnown RBP13.13□□□□□ -0.31
RFC4-208ENST00000447345 MYCT1Q8N699 235 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 PRIMPOLQ96LW4 560 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 FZD8Q9H461 694 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 NXF3Q9H4D5 531 aaKnown RBP13.13□□□□□ -0.31
RFC4-208ENST00000447345 PDZD7Q9H5P4 517 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 FAM13BQ9NYF5 915 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 IPPQ9Y573 584 aa13.13□□□□□ -0.31
RFC4-208ENST00000447345 ACKR2O00590 384 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 POLR2DO15514 142 aaKnown RBP13.12□□□□□ -0.31
RFC4-208ENST00000447345 HOXA2O43364 376 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 SMTNP53814 917 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 ADGRE1Q14246 886 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 E2F4Q16254 413 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 FAM187BQ17R55 369 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 EEF1DP3Q658K8 133 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 SLC27A1Q6PCB7 646 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 TAS1R3Q7RTX0 852 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 TMEM192Q8IY95 271 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 LRRC43Q8N309 656 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 MICALL1Q8N3F8 863 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 SMG8Q8ND04 991 aaKnown RBP13.12□□□□□ -0.31
RFC4-208ENST00000447345 DDX12PQ92771 950 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 PGBD4Q96DM1 585 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 CCDC51Q96ER9 411 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 CASD1Q96PB1 797 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 TRAIPQ9BWF2 469 aa13.12□□□□□ -0.31
RFC4-208ENST00000447345 SCAND2PQ9GZW5 306 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms