RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 GABPB2Q8TAK5 448 aaPredicted RBP17.79■□□□□ 0.44
TCOF1-206ENST00000445265 SAAL1Q96ER3 474 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 INO80BQ9C086 356 aaPredicted RBP17.79■□□□□ 0.44
TCOF1-206ENST00000445265 VCX3BQ9H321 246 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 P4HA2O15460 535 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 CYP26A1O43174 497 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 DCTN3O75935 186 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 JAMLQ86YT9 394 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 OR2W6PQ8NHA6 318 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 PAGR1Q9BTK6 254 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 GOLPH3Q9H4A6 298 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 HSPBP1Q9NZL4 362 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 MAD1L1Q9Y6D9 718 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 MED24O75448 989 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 PBX1P40424 430 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 AARSP49588 968 aaKnown RBP eCLIP17.79■□□□□ 0.442e-6■■■□□ 15.7
TCOF1-206ENST00000445265 EZH2Q15910 746 aaKnown RBP17.79■□□□□ 0.44
TCOF1-206ENST00000445265 ZC2HC1CQ53FD0 456 aaPredicted RBP17.79■□□□□ 0.44
TCOF1-206ENST00000445265 BSPRYQ5W0U4 402 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 SYDE1Q6ZW31 735 aaPredicted RBP17.79■□□□□ 0.44
TCOF1-206ENST00000445265 KSR1Q8IVT5 923 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 KLC4Q9NSK0 619 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 XRN1Q8IZH2 1706 aaKnown RBP17.79■□□□□ 0.44
TCOF1-206ENST00000445265 CFAP73A6NFT4 308 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 CALB1P05937 261 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 TBXAS1P24557 533 aaPredicted RBP17.78■□□□□ 0.44
TCOF1-206ENST00000445265 HSD17B3P37058 310 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 BBS9Q3SYG4 887 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 TRMT10CQ7L0Y3 403 aaKnown RBP17.78■□□□□ 0.44
TCOF1-206ENST00000445265 CDKL2Q92772 493 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 PNMA5Q96PV4 448 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 CALN1Q9BXU9 219 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 ATP5HO75947 161 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 PLS3P13797 630 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 SLC1A1P43005 524 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 TMEM270Q6UE05 265 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 EPM2AIP1Q7L775 607 aaPredicted RBP17.78■□□□□ 0.44
TCOF1-206ENST00000445265 TTC13Q8NBP0 860 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 SCFD1Q8WVM8 642 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 MTMR8Q96EF0 704 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 RAVER2Q9HCJ3 691 aaKnown RBP17.78■□□□□ 0.44
TCOF1-206ENST00000445265 NOP53Q9NZM5 478 aaKnown RBP17.78■□□□□ 0.44
TCOF1-206ENST00000445265 NXF1Q9UBU9 619 aaKnown RBP17.78■□□□□ 0.44
TCOF1-206ENST00000445265 ALG6Q9Y672 507 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 CYTH3O43739 400 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 HDLBPQ00341 1268 aaKnown RBP17.78■□□□□ 0.44
TCOF1-206ENST00000445265 MEI1Q5TIA1 1274 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 ZNF662Q6ZS27 426 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 SEPT14Q6ZU15 432 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 TRIM50Q86XT4 487 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 ACTRT1Q8TDG2 376 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 ARL8AQ96BM9 186 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 TFRCP02786 760 aaKnown RBP17.78■□□□□ 0.44
TCOF1-206ENST00000445265 MYCNP04198 464 aaPredicted RBP17.78■□□□□ 0.44
TCOF1-206ENST00000445265 KCTD6Q8NC69 237 aa17.78■□□□□ 0.44
TCOF1-206ENST00000445265 PJA2O43164 708 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 NPEPPSP55786 919 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 KRT17Q04695 432 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 FUT2Q10981 343 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 NCAPG2Q86XI2 1143 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 C1orf54Q8WWF1 131 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 XPO6Q96QU8 1125 aaKnown RBP17.77■□□□□ 0.44
TCOF1-206ENST00000445265 RIT2Q99578 217 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 LTN1O94822 1766 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 ARL4CP56559 192 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 MKRN3Q13064 507 aaKnown RBP17.77■□□□□ 0.44
TCOF1-206ENST00000445265 GPD1LQ8N335 351 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 CFAP61Q8NHU2 1237 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 RNF34Q969K3 372 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 AIPL1Q9NZN9 384 aa17.77■□□□□ 0.44
TCOF1-206ENST00000445265 KLRC4O43908 158 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 HSPA9P38646 679 aaKnown RBP17.77■□□□□ 0.43
TCOF1-206ENST00000445265 SEC24CP53992 1094 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 IRX4P78413 519 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 PARP9Q8IXQ6 854 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 SCYL3Q8IZE3 742 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 ATL2Q8NHH9 583 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 BLOC1S4Q9NUP1 217 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 BCAP29Q9UHQ4 241 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 MSH4O15457 936 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 FGFR4P22455 802 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 GIT2Q14161 759 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 MAP3K21Q5TCX8 1036 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 DARS2Q6PI48 645 aaKnown RBP17.77■□□□□ 0.43
TCOF1-206ENST00000445265 PCGF5Q86SE9 256 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 FBXO41Q8TF61 875 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 CYFIP2Q96F07 1278 aa17.77■□□□□ 0.43
TCOF1-206ENST00000445265 A6NJR5 290 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 FDX1P10109 184 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 SCP2P22307 547 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 YWHABP31946 246 aaKnown RBP17.76■□□□□ 0.43
TCOF1-206ENST00000445265 GCKP35557 465 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 AFAP1L2Q8N4X5 818 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 NSUN6Q8TEA1 469 aaKnown RBP17.76■□□□□ 0.43
TCOF1-206ENST00000445265 TLR10Q9BXR5 811 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 CELF4Q9BZC1 486 aaKnown RBP17.76■□□□□ 0.43
TCOF1-206ENST00000445265 MRC1P22897 1456 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 IQANK1A0A1B0GTG1 560 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 ARHGAP42A6NI28 874 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 TLR3O15455 904 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms