RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 NCLP19338 710 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 IBSPP21815 317 aaPredicted RBP14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 CASP1P29466 404 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 ME1P48163 572 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 NCKAP1LP55160 1127 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 NUCB2P80303 420 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 AGMOQ6ZNB7 445 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 TMEM161BQ8NDZ6 487 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 KCNN1Q92952 543 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 CASD1Q96PB1 797 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 NTPCRQ9BSD7 190 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 RNF39Q9H2S5 420 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 IKZF4Q9H2S9 585 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 PDZD7Q9H5P4 517 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 ELAC1Q9H777 363 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 CERS4Q9HA82 394 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 CHST12Q9NRB3 414 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 FAM105AQ9NUU6 356 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 KBTBD4Q9NVX7 518 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 TMEM161AQ9NX61 479 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 KCND2Q9NZV8 630 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 MSRAQ9UJ68 235 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 ODF2LQ9ULJ1 636 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 MRPL42Q9Y6G3 142 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 CITO14578 2027 aa14.19□□□□□ -0.14
PDLIM2-212ENST00000443561 PHLPP2Q6ZVD8 1323 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 FRMD3A2A2Y4 597 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 MEFVO15553 781 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 PRKCBP05771 671 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 MAPTP10636 758 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 PFKFB1P16118 471 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 STAT6P42226 847 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 ERVK-21P61565 698 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 LONRF3Q496Y0 759 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 PAN2Q504Q3 1202 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 ODR4Q5SWX8 454 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 ZNF697Q5TEC3 545 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 PPP2R2DQ66LE6 453 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 DYMQ7RTS9 669 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 MRPL10Q7Z7H8 261 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 GRAMD1CQ8IYS0 662 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 SPIRE2Q8WWL2 714 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 DDX12PQ92771 950 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 DHX58Q96C10 678 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 DRC1Q96MC2 740 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 TIPINQ9BVW5 301 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 HAPLN2Q9GZV7 340 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 CIZ1Q9ULV3 898 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 HES2Q9Y543 173 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 INSL6Q9Y581 213 aa14.18□□□□□ -0.14
PDLIM2-212ENST00000443561 COL6A3P12111 3177 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 MYO7AQ13402 2215 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 PRRC2BQ5JSZ5 2229 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 A0A1B0GUA9 196 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 A0A1B0GVL5 298 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 ACKR2O00590 384 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 POLR2DO15514 142 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 ZNF623O75123 536 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 PPP1R37O75864 691 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 CASP5P51878 434 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 PPP2R5AQ15172 486 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 ADALQ6DHV7 355 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 TWF2Q6IBS0 349 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 SLC39A4Q6P5W5 647 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 CCDC73Q6ZRK6 1079 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 SFR1Q86XK3 245 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 CMTR2Q8IYT2 770 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 GLIS3Q8NEA6 775 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 DEPTORQ8TB45 409 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 MYLIPQ8WY64 445 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 CLP1Q92989 425 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 YME1L1Q96TA2 773 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 CDX2Q99626 313 aaPredicted RBP14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 ZBED2Q9BTP6 218 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 STRA6Q9BX79 667 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 NXF3Q9H4D5 531 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 PRDM12Q9H4Q4 367 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 CWH43Q9H720 699 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 PTPRHQ9HD43 1115 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 PRMT7Q9NVM4 692 aaPredicted RBP14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 CCDC39Q9UFE4 941 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 IPPQ9Y573 584 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 PCDHB2Q9Y5E7 798 aa14.17□□□□□ -0.14
PDLIM2-212ENST00000443561 ERLIN2O94905 339 aa14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 ZSCAN20P17040 1043 aaPredicted RBP14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 PROZP22891 400 aa14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 CMA1P23946 247 aa14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 NMT1P30419 496 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 AXLP30530 894 aa14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 ANP32AP39687 249 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 TXLNAP40222 546 aa14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 NDUFA8P51970 172 aa14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 EHHADHQ08426 723 aa14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 DMP1Q13316 513 aaPredicted RBP14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 PCBP1Q15365 356 aaKnown RBP eCLIP14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 FAM43BQ6ZT52 329 aaPredicted RBP14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 ZBTB8OSQ8IWT0 167 aa14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 CEP120Q8N960 986 aa14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 GSTCDQ8NEC7 633 aa14.16□□□□□ -0.14
PDLIM2-212ENST00000443561 RASSF8Q8NHQ8 419 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms