RNA–Protein interactions for RNA: ENST00000442309.5

GCFC2-204, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5

Gene GCFC2, Length 642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-204ENST00000442309 SMRP1Q8NCR6 262 aa23.18■■□□□ 1.3
GCFC2-204ENST00000442309 URGCPQ8TCY9 931 aa23.18■■□□□ 1.3
GCFC2-204ENST00000442309 TMEM169Q96HH4 297 aa23.18■■□□□ 1.3
GCFC2-204ENST00000442309 CPB2Q96IY4 423 aa23.18■■□□□ 1.3
GCFC2-204ENST00000442309 TUFT1Q9NNX1 390 aa23.18■■□□□ 1.3
GCFC2-204ENST00000442309 NOL7Q9UMY1 257 aaKnown RBP23.18■■□□□ 1.3
GCFC2-204ENST00000442309 PI4K2BG5E9Z4 385 aa23.17■■□□□ 1.3
GCFC2-204ENST00000442309 GLRA2P23416 452 aa23.17■■□□□ 1.3
GCFC2-204ENST00000442309 ORC2Q13416 577 aaPredicted RBP23.17■■□□□ 1.3
GCFC2-204ENST00000442309 POTEGQ6S5H5 508 aa23.17■■□□□ 1.3
GCFC2-204ENST00000442309 MRPL10Q7Z7H8 261 aaKnown RBP23.17■■□□□ 1.3
GCFC2-204ENST00000442309 TMEM173Q86WV6 379 aaPredicted RBP23.17■■□□□ 1.3
GCFC2-204ENST00000442309 ERMNQ8TAM6 284 aa23.17■■□□□ 1.3
GCFC2-204ENST00000442309 RSPH1Q8WYR4 309 aa23.17■■□□□ 1.3
GCFC2-204ENST00000442309 RSAD1Q9HA92 442 aa23.17■■□□□ 1.3
GCFC2-204ENST00000442309 GPRC5CQ9NQ84 441 aa23.17■■□□□ 1.3
GCFC2-204ENST00000442309 FSD2A1L4K1 749 aa23.16■■□□□ 1.3
GCFC2-204ENST00000442309 C19orf67A6NJJ6 358 aa23.16■■□□□ 1.3
GCFC2-204ENST00000442309 ST18O60284 1047 aa23.16■■□□□ 1.3
GCFC2-204ENST00000442309 XRCC6P12956 609 aaKnown RBP eCLIP23.16■■□□□ 1.3
GCFC2-204ENST00000442309 AFF1P51825 1210 aaKnown RBP23.16■■□□□ 1.3
GCFC2-204ENST00000442309 MBTD1Q05BQ5 628 aa23.16■■□□□ 1.3
GCFC2-204ENST00000442309 SMC1AQ14683 1233 aaKnown RBP23.16■■□□□ 1.3
GCFC2-204ENST00000442309 NOTUMQ6P988 496 aa23.16■■□□□ 1.3
GCFC2-204ENST00000442309 POLR3CQ9BUI4 534 aaPredicted RBP23.16■■□□□ 1.3
GCFC2-204ENST00000442309 EIF2AQ9BY44 585 aaKnown RBP23.16■■□□□ 1.3
GCFC2-204ENST00000442309 DNAJB4Q9UDY4 337 aa23.16■■□□□ 1.3
GCFC2-204ENST00000442309 B4GALT3O60512 393 aa23.15■■□□□ 1.3
GCFC2-204ENST00000442309 GALTP07902 379 aa23.15■■□□□ 1.3
GCFC2-204ENST00000442309 SRGAP2BP0DMP2 458 aa23.15■■□□□ 1.3
GCFC2-204ENST00000442309 NCLP19338 710 aaKnown RBP23.15■■□□□ 1.3
GCFC2-204ENST00000442309 AXLP30530 894 aa23.15■■□□□ 1.3
GCFC2-204ENST00000442309 TRAPPC10P48553 1259 aa23.15■■□□□ 1.3
GCFC2-204ENST00000442309 NCBP1Q09161 790 aaKnown RBP23.15■■□□□ 1.3
GCFC2-204ENST00000442309 TMEM31Q5JXX7 168 aa23.15■■□□□ 1.3
GCFC2-204ENST00000442309 ZNF280BQ86YH2 543 aa23.15■■□□□ 1.3
GCFC2-204ENST00000442309 SMG8Q8ND04 991 aaKnown RBP23.15■■□□□ 1.3
GCFC2-204ENST00000442309 IGSF21Q96ID5 467 aa23.15■■□□□ 1.3
GCFC2-204ENST00000442309 NACC1Q96RE7 527 aa23.15■■□□□ 1.3
GCFC2-204ENST00000442309 POP1Q99575 1024 aaKnown RBP23.15■■□□□ 1.3
GCFC2-204ENST00000442309 LRFN3Q9BTN0 628 aa23.15■■□□□ 1.3
GCFC2-204ENST00000442309 DBR1Q9UK59 544 aaKnown RBP23.15■■□□□ 1.3
GCFC2-204ENST00000442309 USP15Q9Y4E8 981 aaPredicted RBP23.15■■□□□ 1.3
GCFC2-204ENST00000442309 IPPQ9Y573 584 aa23.15■■□□□ 1.3
GCFC2-204ENST00000442309 CNTNAP2Q9UHC6 1331 aa23.14■■□□□ 1.3
GCFC2-204ENST00000442309 LRRIQ4A6NIV6 560 aa23.14■■□□□ 1.29
GCFC2-204ENST00000442309 POMCP01189 267 aa23.14■■□□□ 1.29
GCFC2-204ENST00000442309 ITGA4P13612 1032 aa23.14■■□□□ 1.29
GCFC2-204ENST00000442309 RPA1P27694 616 aa23.14■■□□□ 1.29
GCFC2-204ENST00000442309 SLC11A1P49279 550 aa23.14■■□□□ 1.29
GCFC2-204ENST00000442309 POU5F1BQ06416 359 aa23.14■■□□□ 1.29
GCFC2-204ENST00000442309 PCBP1Q15365 356 aaKnown RBP eCLIP23.14■■□□□ 1.29
GCFC2-204ENST00000442309 IFNLR1Q8IU57 520 aaPredicted RBP23.14■■□□□ 1.29
GCFC2-204ENST00000442309 VPS52Q8N1B4 723 aa23.14■■□□□ 1.29
GCFC2-204ENST00000442309 BCL7CQ8WUZ0 217 aaPredicted RBP23.14■■□□□ 1.29
GCFC2-204ENST00000442309 AUTS2Q8WXX7 1259 aa23.14■■□□□ 1.29
GCFC2-204ENST00000442309 FAM193BQ96PV7 902 aaPredicted RBP23.14■■□□□ 1.29
GCFC2-204ENST00000442309 APOL6Q9BWW8 343 aa23.14■■□□□ 1.29
GCFC2-204ENST00000442309 APOL5Q9BWW9 433 aa23.14■■□□□ 1.29
GCFC2-204ENST00000442309 C11orf16Q9NQ32 467 aa23.14■■□□□ 1.29
GCFC2-204ENST00000442309 HES2Q9Y543 173 aa23.14■■□□□ 1.29
GCFC2-204ENST00000442309 C2orf71A6NGG8 1288 aa23.13■■□□□ 1.29
GCFC2-204ENST00000442309 DDHD2O94830 711 aa23.13■■□□□ 1.29
GCFC2-204ENST00000442309 CXCL14O95715 111 aa23.13■■□□□ 1.29
GCFC2-204ENST00000442309 U2AF2P26368 475 aaKnown RBP eCLIP23.13■■□□□ 1.299e-8■■■■□ 21.5
GCFC2-204ENST00000442309 KCNC3Q14003 757 aa23.13■■□□□ 1.29
GCFC2-204ENST00000442309 BMS1Q14692 1282 aaKnown RBP23.13■■□□□ 1.29
GCFC2-204ENST00000442309 AMHR2Q16671 573 aa23.13■■□□□ 1.29
GCFC2-204ENST00000442309 CDR2LQ86X02 465 aaPredicted RBP23.13■■□□□ 1.29
GCFC2-204ENST00000442309 C4orf32Q8N8J7 132 aa23.13■■□□□ 1.29
GCFC2-204ENST00000442309 MRPL43Q8N983 215 aaKnown RBP23.13■■□□□ 1.29
GCFC2-204ENST00000442309 CNNM3Q8NE01 707 aa23.13■■□□□ 1.29
GCFC2-204ENST00000442309 MCPH1Q8NEM0 835 aa23.13■■□□□ 1.29
GCFC2-204ENST00000442309 CCDC51Q96ER9 411 aa23.13■■□□□ 1.29
GCFC2-204ENST00000442309 ZBP1Q9H171 429 aa23.13■■□□□ 1.29
GCFC2-204ENST00000442309 CSRNP2Q9H175 543 aa23.13■■□□□ 1.29
GCFC2-204ENST00000442309 RNF39Q9H2S5 420 aa23.13■■□□□ 1.29
GCFC2-204ENST00000442309 UPF2Q9HAU5 1272 aaKnown RBP23.13■■□□□ 1.29
GCFC2-204ENST00000442309 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.12■■□□□ 1.29
GCFC2-204ENST00000442309 ARHGEF35A5YM69 484 aa23.12■■□□□ 1.29
GCFC2-204ENST00000442309 B4GALT5O43286 388 aa23.12■■□□□ 1.29
GCFC2-204ENST00000442309 DCXO43602 365 aa23.12■■□□□ 1.29
GCFC2-204ENST00000442309 ALADP13716 330 aa23.12■■□□□ 1.29
GCFC2-204ENST00000442309 ARF4P18085 180 aaPredicted RBP23.12■■□□□ 1.29
GCFC2-204ENST00000442309 CCT6AP40227 531 aaKnown RBP23.12■■□□□ 1.29
GCFC2-204ENST00000442309 TOB1P50616 345 aaPredicted RBP23.12■■□□□ 1.29
GCFC2-204ENST00000442309 HAUS3Q68CZ6 603 aa23.12■■□□□ 1.29
GCFC2-204ENST00000442309 ANKRD54Q6NXT1 300 aa23.12■■□□□ 1.29
GCFC2-204ENST00000442309 PADI6Q6TGC4 694 aa23.12■■□□□ 1.29
GCFC2-204ENST00000442309 NFKBIZQ9BYH8 718 aa23.12■■□□□ 1.29
GCFC2-204ENST00000442309 TRIM6Q9C030 488 aaPredicted RBP23.12■■□□□ 1.29
GCFC2-204ENST00000442309 PCDHB6Q9Y5E3 794 aa23.12■■□□□ 1.29
GCFC2-204ENST00000442309 CARNS1A5YM72 827 aa23.11■■□□□ 1.29
GCFC2-204ENST00000442309 GPR37L1O60883 481 aa23.11■■□□□ 1.29
GCFC2-204ENST00000442309 CD2BP2O95400 341 aaKnown RBP23.11■■□□□ 1.29
GCFC2-204ENST00000442309 FXR2P51116 673 aaKnown RBP eCLIP23.11■■□□□ 1.29
GCFC2-204ENST00000442309 ECM1Q16610 540 aa23.11■■□□□ 1.29
GCFC2-204ENST00000442309 MCTP1Q6DN14 999 aa23.11■■□□□ 1.29
GCFC2-204ENST00000442309 TMEM184AQ6ZMB5 413 aa23.11■■□□□ 1.29
GCFC2-204ENST00000442309 DDX53Q86TM3 631 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms