RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ITGA4P13612 1032 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 FDPSP14324 419 aaKnown RBP13.11□□□□□ -0.31
TTC28-203ENST00000442232 ITIH3Q06033 890 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 SPIRE1Q08AE8 756 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
TTC28-203ENST00000442232 NOTUMQ6P988 496 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 DDX53Q86TM3 631 aaKnown RBP13.11□□□□□ -0.31
TTC28-203ENST00000442232 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
TTC28-203ENST00000442232 CCDC51Q96ER9 411 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 IGSF21Q96ID5 467 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 RIPOR3Q96MK2 946 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 NECTIN4Q96NY8 510 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 TRIM6Q9C030 488 aaPredicted RBP13.11□□□□□ -0.31
TTC28-203ENST00000442232 ZBP1Q9H171 429 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 KCNH6Q9H252 994 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 NRDE2Q9H7Z3 1164 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 TTC12Q9H892 705 aaPredicted RBP13.11□□□□□ -0.31
TTC28-203ENST00000442232 TSHZ2Q9NRE2 1034 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 ANKEF1Q9NU02 776 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 HCFC2Q9Y5Z7 792 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 MUC6Q6W4X9 2439 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 BTBD18B2RXH4 712 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 JAK2O60674 1132 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 CLASP2O75122 1294 aaKnown RBP13.1□□□□□ -0.31
TTC28-203ENST00000442232 NR1I2O75469 434 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 LYPLA2O95372 231 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 GALTP07902 379 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 TXKP42681 527 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 MTHFRP42898 656 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 SLC11A1P49279 550 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 ZXDAP98168 799 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 KCNC3Q14003 757 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 TRIM67Q6ZTA4 783 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 HFE2Q6ZVN8 426 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 PPFIBP1Q86W92 1011 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 SUGP1Q8IWZ8 645 aaKnown RBP13.1□□□□□ -0.31
TTC28-203ENST00000442232 TNFRSF25Q93038 417 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 EMILIN2Q9BXX0 1053 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 S1PR5Q9H228 398 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 MINDY3Q9H8M7 445 aa13.1□□□□□ -0.31
TTC28-203ENST00000442232 TMEM221A6NGB7 291 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 MEIS3P2A8K0S8 358 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 M0R296 226 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 SLITRK3O94933 977 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 CTSAP10619 480 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 NCLP19338 710 aaKnown RBP13.09□□□□□ -0.31
TTC28-203ENST00000442232 ATP2B1P20020 1258 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 SP100P23497 879 aaPredicted RBP13.09□□□□□ -0.31
TTC28-203ENST00000442232 SYCE2Q6PIF2 218 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 ELMSAN1Q6PJG2 1045 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 MRPL10Q7Z7H8 261 aaKnown RBP13.09□□□□□ -0.31
TTC28-203ENST00000442232 CABP7Q86V35 215 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 ERMNQ8TAM6 284 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 AUTS2Q8WXX7 1259 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 PBXIP1Q96AQ6 731 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 C8orf76Q96K31 380 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 TMEM175Q9BSA9 504 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 POLR3FQ9H1D9 316 aaPredicted RBP13.09□□□□□ -0.31
TTC28-203ENST00000442232 ADAM7Q9H2U9 754 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 DNAJB4Q9UDY4 337 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 FAN1Q9Y2M0 1017 aa13.09□□□□□ -0.31
TTC28-203ENST00000442232 TECTAO75443 2155 aa13.08□□□□□ -0.31
TTC28-203ENST00000442232 ZBTB39O15060 712 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 TSPAN1O60635 241 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 USO1O60763 962 aaKnown RBP13.08□□□□□ -0.32
TTC28-203ENST00000442232 POMCP01189 267 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 ALDH2P05091 517 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 URODP06132 367 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 MCM7P33993 719 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 OR1G1P47890 313 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 PTENP60484 403 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 POU5F1BQ06416 359 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 SIGLEC14Q08ET2 396 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 PTPN21Q16825 1174 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 TMEM132AQ24JP5 1023 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 RARS2Q5T160 578 aaKnown RBP13.08□□□□□ -0.32
TTC28-203ENST00000442232 AGMOQ6ZNB7 445 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 TMEM173Q86WV6 379 aaPredicted RBP13.08□□□□□ -0.32
TTC28-203ENST00000442232 TDRD5Q8NAT2 981 aaKnown RBP13.08□□□□□ -0.32
TTC28-203ENST00000442232 CPB2Q96IY4 423 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 HSD17B14Q9BPX1 270 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 APOL6Q9BWW8 343 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 XPNPEP1Q9NQW7 623 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 LIMCH1Q9UPQ0 1083 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 SSX2IPQ9Y2D8 614 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 IPPQ9Y573 584 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 IRAK3Q9Y616 596 aa13.08□□□□□ -0.32
TTC28-203ENST00000442232 POTEMA6NI47 508 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 LRRIQ4A6NIV6 560 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 SSBP05455 408 aaKnown RBP eCLIP13.07□□□□□ -0.32
TTC28-203ENST00000442232 KLRC2P26717 231 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 HOXA11P31270 313 aaPredicted RBP13.07□□□□□ -0.32
TTC28-203ENST00000442232 HOXD11P31277 338 aaPredicted RBP13.07□□□□□ -0.32
TTC28-203ENST00000442232 MLH1P40692 756 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 HMGN5P82970 282 aaKnown RBP13.07□□□□□ -0.32
TTC28-203ENST00000442232 GUCY1B3Q02153 619 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 ORC2Q13416 577 aaPredicted RBP13.07□□□□□ -0.32
TTC28-203ENST00000442232 CAPSQ13938 189 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 PTPN14Q15678 1187 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 ATAT1Q5SQI0 421 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms