RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 KRT76Q01546 638 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 SLC7A5Q01650 507 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ADCY1Q08828 1119 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 GTF2H3Q13889 308 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 TWF2Q6IBS0 349 aaKnown RBP7.07□□□□□ -1.28
USP46-201ENST00000441222 APPL2Q8NEU8 664 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 SNF8Q96H20 258 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 DYDC2Q96IM9 177 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 PARVAQ9NVD7 372 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ZHX2Q9Y6X8 837 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 LOC102724428A0A0B4J2F2 783 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 SOWAHDA6NJG2 315 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ANGPT2O15123 496 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 PJA2O43164 708 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ORC4O43929 436 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 GPC3P51654 580 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ARFIP2P53365 341 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 SIK1P57059 783 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 CCDC15Q0P6D6 951 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ANO4Q32M45 955 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 THEMIS2Q5TEJ8 643 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 MIGA2Q7L4E1 593 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 RHOT1Q8IXI2 618 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 B4GALNT2Q8NHY0 566 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.07□□□□□ -1.28
USP46-201ENST00000441222 EEF2KMTQ96G04 330 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ZFP42Q96MM3 310 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 TIPINQ9BVW5 301 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 TAF1DQ9H5J8 278 aaPredicted RBP7.07□□□□□ -1.28
USP46-201ENST00000441222 DDX28Q9NUL7 540 aaKnown RBP7.07□□□□□ -1.28
USP46-201ENST00000441222 NRBP1Q9UHY1 535 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ATP10AO60312 1499 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 VGLL3A8MV65 326 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 BNIP3LO60238 219 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 TOMM70O94826 608 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ALDH1A1P00352 501 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 HMOX2P30519 316 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 RCAN1P53805 252 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ARMC2Q8NEN0 867 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 COA7Q96BR5 231 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 AP1M1Q9BXS5 423 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 NDFIP2Q9NV92 336 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 TMEM161AQ9NX61 479 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 NSMCE4AQ9NXX6 385 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 MAPKBP1O60336 1514 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ERVV-1B6SEH8 477 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 KIF1CO43896 1103 aaKnown RBP7.07□□□□□ -1.28
USP46-201ENST00000441222 RALBP11234 206 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 CYP2C19P33261 490 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 PDCLQ13371 301 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 MTMR1Q13613 665 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ZNF568Q3ZCX4 644 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 PLD3Q8IV08 490 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 NSUN7Q8NE18 718 aaKnown RBP7.07□□□□□ -1.28
USP46-201ENST00000441222 AFG1LQ8WV93 481 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 BPIFA3Q9BQP9 254 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 PIDD1Q9HB75 910 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 SLAIN2Q9P270 581 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 ADAMTS1Q9UHI8 967 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 TCOF1Q13428 1488 aaKnown RBP7.07□□□□□ -1.28
USP46-201ENST00000441222 KAT6AQ92794 2004 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 TNPO2O14787 897 aaKnown RBP7.07□□□□□ -1.28
USP46-201ENST00000441222 TYK2P29597 1187 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 GUCY1A3Q02108 690 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 HIC1Q14526 733 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 MTFR1Q15390 333 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 BBS7Q8IWZ6 715 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 OR6P1Q8NGX9 317 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 SMARCAL1Q9NZC9 954 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 FEM1BQ9UK73 627 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 KIAA0391O15091 583 aaKnown RBP7.07□□□□□ -1.28
USP46-201ENST00000441222 TRAPPC3O43617 180 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 PHKA1P46020 1223 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 PMS2P54278 862 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 KCNQ4P56696 695 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 GPS1Q13098 491 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 LAMC2Q13753 1193 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 STAT4Q14765 748 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 BEND6Q5SZJ8 279 aaPredicted RBP7.07□□□□□ -1.28
USP46-201ENST00000441222 E4F1Q66K89 784 aaPredicted RBP7.07□□□□□ -1.28
USP46-201ENST00000441222 SCARA5Q6ZMJ2 495 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 FAM196AQ6ZSG2 479 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 SCN4BQ8IWT1 228 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 HIPK4Q8NE63 616 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 TGS1Q96RS0 853 aaKnown RBP7.07□□□□□ -1.28
USP46-201ENST00000441222 MRPL1Q9BYD6 325 aaKnown RBP7.07□□□□□ -1.28
USP46-201ENST00000441222 FOXP3Q9BZS1 431 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 SLC9A2Q9UBY0 812 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 TJP2Q9UDY2 1190 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 MAD2L2Q9UI95 211 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 STK36Q9NRP7 1315 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 RSPH10B2B2RC85 870 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 PRPF4O43172 522 aaKnown RBP eCLIP7.06□□□□□ -1.28
USP46-201ENST00000441222 MFAP3LO75121 409 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 PALMO75781 387 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 EIF2S1P05198 315 aaKnown RBP7.06□□□□□ -1.28
USP46-201ENST00000441222 HNRNPCP07910 306 aaKnown RBP eCLIP7.06□□□□□ -1.28
USP46-201ENST00000441222 RSPH10BP0C881 870 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 STAT3P40763 770 aa7.06□□□□□ -1.28
USP46-201ENST00000441222 RASGRF1Q13972 1273 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms