RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 FBXO40Q9UH90 709 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 GOLGA8IPA6NC78 632 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 GOLGA8JA6NMD2 632 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 GOLGA8KD6RF30 607 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 STAM2O75886 525 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 MYL7Q01449 175 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 PPATQ06203 517 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 CBWD6Q4V339 395 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 CBWD3Q5JTY5 395 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 CBWD5Q5RIA9 395 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 DNERQ8NFT8 737 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 TRIM58Q8NG06 486 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 BORCS6Q96GS4 357 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 IWS1Q96ST2 819 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 SH3GL2Q99962 352 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 TIPINQ9BVW5 301 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 CXorf56Q9H5V9 222 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 ZNF408Q9H9D4 720 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 SALL4Q9UJQ4 1053 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 CAPN6Q9Y6Q1 641 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 KIAA1217Q5T5P2 1943 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 PFASO15067 1338 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 A0A087X0T9 212 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 DENND3A2RUS2 1198 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 SPATA31C2B4DYI2 1134 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 FAM228BP0C875 321 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 MRPS25P82663 173 aaKnown RBP15.34■□□□□ 0.05
LIMD1-202ENST00000440097 SP2Q02086 613 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 PTK2Q05397 1052 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 NFIL3Q16649 462 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 ZNF662Q6ZS27 426 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 ASCC2Q9H1I8 757 aaPredicted RBP15.34■□□□□ 0.05
LIMD1-202ENST00000440097 DMAC2Q9NW81 257 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 AIPL1Q9NZN9 384 aa15.34■□□□□ 0.05
LIMD1-202ENST00000440097 MAP2K2P36507 400 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 NPTX2P47972 431 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 ALDH5A1P51649 535 aaPredicted RBP15.33■□□□□ 0.04
LIMD1-202ENST00000440097 SLC18A3Q16572 532 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 KIAA0753Q2KHM9 967 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 CCDC70Q6NSX1 233 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 CNPY4Q8N129 248 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 XXYLT1Q8NBI6 393 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 PSMB7Q99436 277 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 STRA6Q9BX79 667 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.33■□□□□ 0.042e-6■■■■■ 138
LIMD1-202ENST00000440097 HSPBP1Q9NZL4 362 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 LCA5LO95447 670 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 MAPTP10636 758 aaKnown RBP15.33■□□□□ 0.04
LIMD1-202ENST00000440097 CHRM1P11229 460 aaPredicted RBP15.33■□□□□ 0.04
LIMD1-202ENST00000440097 USP8P40818 1118 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 PPP2R5AQ15172 486 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 ASTE1Q2TB18 679 aaPredicted RBP15.33■□□□□ 0.04
LIMD1-202ENST00000440097 DPY19L2P1Q6NXN4 242 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 RIOX2Q8IUF8 465 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 ARL8AQ96BM9 186 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 OPTNQ96CV9 577 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 BICD1Q96G01 975 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 SENP7Q9BQF6 1050 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 LRRC1Q9BTT6 524 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 DMGDHQ9UI17 866 aaKnown RBP15.33■□□□□ 0.04
LIMD1-202ENST00000440097 EXOC7Q9UPT5 735 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 CAPN7Q9Y6W3 813 aa15.33■□□□□ 0.04
LIMD1-202ENST00000440097 A0A0G2JLL6 359 aaPredicted RBP15.32■□□□□ 0.04
LIMD1-202ENST00000440097 GTPBP10A4D1E9 387 aaKnown RBP15.32■□□□□ 0.04
LIMD1-202ENST00000440097 GFPT2O94808 682 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 DNA2P51530 1060 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 POLGP54098 1239 aaPredicted RBP15.32■□□□□ 0.04
LIMD1-202ENST00000440097 DLG4P78352 724 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 GTF2BQ00403 316 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 CETN1Q12798 172 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 ARHGAP44Q17R89 818 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 TTMPQ5BVD1 217 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 IQCEQ6IPM2 695 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 INTS8Q75QN2 995 aaKnown RBP15.32■□□□□ 0.04
LIMD1-202ENST00000440097 PRRT2Q7Z6L0 340 aaPredicted RBP15.32■□□□□ 0.04
LIMD1-202ENST00000440097 DNAAF5Q86Y56 855 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 PROCA1Q8NCQ7 364 aaPredicted RBP15.32■□□□□ 0.04
LIMD1-202ENST00000440097 KIFAP3Q92845 792 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 DOCK5Q9H7D0 1870 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 NFASCO94856 1347 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 FAM170AA1A519 330 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 ANO9A1A5B4 782 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 PGK2P07205 417 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 POTEJP0CG39 1038 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 GCLMP48507 274 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 VAMP7P51809 220 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 PDCLQ13371 301 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 VPS36Q86VN1 386 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 SLC9A9Q8IVB4 645 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 TSEN2Q8NCE0 465 aaKnown RBP15.32■□□□□ 0.04
LIMD1-202ENST00000440097 CCDC127Q96BQ5 260 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 SAAL1Q96ER3 474 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 NOX5Q96PH1 765 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 CYP26B1Q9NR63 512 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 AJAP1Q9UKB5 411 aaPredicted RBP15.32■□□□□ 0.04
LIMD1-202ENST00000440097 TBX20Q9UMR3 447 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 EMSYQ7Z589 1322 aa15.32■□□□□ 0.04
LIMD1-202ENST00000440097 NDUFAB1O14561 156 aa15.31■□□□□ 0.04
LIMD1-202ENST00000440097 OPA1O60313 960 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms