RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ALG6Q9Y672 507 aa12.54□□□□□ -0.4
SMPD4-209ENST00000439886 CYP19A1P11511 503 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-209ENST00000439886 FERP16591 822 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 ZNF24P17028 368 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 EPHB2P29323 1055 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 ZNF76P36508 570 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 SCYL3Q8IZE3 742 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 ZNF384Q8TF68 577 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 ALG3Q92685 438 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 CELF1Q92879 486 aaKnown RBP12.53□□□□□ -0.4
SMPD4-209ENST00000439886 GORASP1Q9BQQ3 440 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 NT5C3AQ9H0P0 336 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 ALG13Q9NP73 1137 aaKnown RBP12.53□□□□□ -0.4
SMPD4-209ENST00000439886 USP17L15C9J2P7 530 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 USP17L13C9JLJ4 530 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 USP17L11C9JVI0 530 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 USP17L18D6R9N7 530 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 USP17L22D6RA61 530 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 USP17L17D6RBQ6 530 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 USP17L19D6RCP7 530 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 USP17L20D6RJB6 530 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 SMAPO00193 183 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 RIPK2O43353 540 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 PCP11498 1178 aaKnown RBP12.53□□□□□ -0.4
SMPD4-209ENST00000439886 CYP11B2P19099 503 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 ALDH3A1P30838 453 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 ABL2P42684 1182 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 PTENP60484 403 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 KCNA1Q09470 495 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 USP17L24Q0WX57 530 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 SEPT2Q15019 361 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 Q4G0T1 1027 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 USP17L6PQ6QN14 398 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 ATP8B4Q8TF62 1192 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 LRRC37BQ96QE4 947 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 VCXQ9H320 206 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 SPATA7Q9P0W8 599 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 CORO1CQ9ULV4 474 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-209ENST00000439886 C2CD2Q9Y426 696 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 IGSF9BQ9UPX0 1349 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 SPEF2Q9C093 1822 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 hCG_2014768A0A024R1R8 64 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 RSPH10B2B2RC85 870 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 ANKRD63C9JTQ0 380 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 KIAA0391O15091 583 aaKnown RBP12.53□□□□□ -0.4
SMPD4-209ENST00000439886 LINGO3P0C6S8 592 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 RSPH10BP0C881 870 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 RPL13P26373 211 aaKnown RBP12.53□□□□□ -0.4
SMPD4-209ENST00000439886 MTM1Q13496 603 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 PRR16Q569H4 304 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 SLC30A10Q6XR72 485 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 MYCT1Q8N699 235 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 RFFLQ8WZ73 363 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 TRAIPQ9BWF2 469 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 HEMGNQ9BXL5 484 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 CDC42EP4Q9H3Q1 356 aaKnown RBP12.53□□□□□ -0.4
SMPD4-209ENST00000439886 SUN2Q9UH99 717 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 PASKQ96RG2 1323 aa12.53□□□□□ -0.4
SMPD4-209ENST00000439886 TCRBV7S2A1N4TA0A589 114 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 DYTNA2CJ06 578 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 RASA4BC9J798 803 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 RASA4O43374 803 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 CALUO43852 315 aaPredicted RBP12.52□□□□□ -0.4
SMPD4-209ENST00000439886 AKAP3O75969 853 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 BAG3O95817 575 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 KLC1Q07866 573 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 BLMHQ13867 455 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 ECM29Q5VYK3 1845 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 DUPD1Q68J44 220 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 OLFML1Q6UWY5 402 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 DNAJC9Q8WXX5 260 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 ATG4AQ8WYN0 398 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 SPOCK2Q92563 424 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 MCUR1Q96AQ8 359 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 TRIM11Q96F44 468 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 PGM2Q96G03 612 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 GBP5Q96PP8 586 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 ADAM7Q9H2U9 754 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 TXLNGQ9NUQ3 528 aa12.52□□□□□ -0.4
SMPD4-209ENST00000439886 FTLP02792 175 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-209ENST00000439886 NR3C1P04150 777 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 UBTFL6P0CB48 400 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-209ENST00000439886 RIPK1Q13546 671 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 ERFEQ4G0M1 354 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-209ENST00000439886 C4orf33Q8N1A6 199 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 VPS52Q8N1B4 723 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 CNBD1Q8NA66 436 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 PIGOQ8TEQ8 1089 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 CENPTQ96BT3 561 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 CEP95Q96GE4 821 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 NACA2Q9H009 215 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 MYLK2Q9H1R3 596 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.52□□□□□ -0.412e-6■□□□□ 11
SMPD4-209ENST00000439886 RHBDL2Q9NX52 303 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 PARP2Q9UGN5 583 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 SUGT1Q9Y2Z0 365 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 BCL9LQ86UU0 1499 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 DISP2A7MBM2 1401 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 BAG2O95816 211 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms