RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 AGTP01019 485 aa13.34□□□□□ -0.27
SLC38A1-202ENST00000439706 SOX5P35711 763 aa13.34□□□□□ -0.27
SLC38A1-202ENST00000439706 ITIH4Q14624 930 aa13.34□□□□□ -0.27
SLC38A1-202ENST00000439706 TMEM119Q4V9L6 283 aa13.34□□□□□ -0.27
SLC38A1-202ENST00000439706 MIS18BP1Q6P0N0 1132 aa13.34□□□□□ -0.27
SLC38A1-202ENST00000439706 C1orf131Q8NDD1 294 aaKnown RBP13.34□□□□□ -0.27
SLC38A1-202ENST00000439706 SUPT20HQ8NEM7 779 aa13.34□□□□□ -0.27
SLC38A1-202ENST00000439706 NT5C3AQ9H0P0 336 aa13.34□□□□□ -0.27
SLC38A1-202ENST00000439706 JMJD4Q9H9V9 463 aa13.34□□□□□ -0.27
SLC38A1-202ENST00000439706 ZNF652Q9Y2D9 606 aa13.34□□□□□ -0.27
SLC38A1-202ENST00000439706 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.34□□□□□ -0.27
SLC38A1-202ENST00000439706 AFF2P51816 1311 aa13.34□□□□□ -0.27
SLC38A1-202ENST00000439706 CFAP73A6NFT4 308 aa13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 CCND1P24385 295 aa13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 CALRP27797 417 aaKnown RBP13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 EPHB2P29323 1055 aa13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 GCLMP48507 274 aa13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 POU5F1Q01860 360 aaKnown RBP13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 GIT2Q14161 759 aa13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 ZNF268Q14587 947 aaPredicted RBP13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 LLGL2Q6P1M3 1020 aa13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 UBL4BQ8N7F7 174 aa13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 FBF1Q8TES7 1133 aa13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 LZTS2Q9BRK4 669 aa13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 C12orf65Q9H3J6 166 aaKnown RBP13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 SLC5A4Q9NY91 659 aa13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 TTC7AQ9ULT0 858 aaPredicted RBP13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 STXBP5LQ9Y2K9 1186 aa13.33□□□□□ -0.27
SLC38A1-202ENST00000439706 ZNF142P52746 1687 aaPredicted RBP13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 FERP16591 822 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 CACNB3P54284 484 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 TCP10Q12799 353 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 FAM182BQ5T319 152 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 APBB1IPQ7Z5R6 666 aaPredicted RBP13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 C3orf20Q8ND61 904 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.33□□□□□ -0.283e-6■■■■■ 50.8
SLC38A1-202ENST00000439706 PGM2Q96G03 612 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 NAP1L3Q99457 506 aaPredicted RBP13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 DLGAP2Q9P1A6 1054 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 TAF1P21675 1872 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 GNAT1P11488 350 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 RPL13P26373 211 aaKnown RBP13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 SLC8A3P57103 927 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 OVGP1Q12889 678 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 C10orf76Q5T2E6 689 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 RPUSD2Q8IZ73 545 aaKnown RBP13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 P3H4Q92791 437 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 ZNF287Q9HBT7 754 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 SIX2Q9NPC8 291 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 ARL2BPQ9Y2Y0 163 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 PCDHA2Q9Y5H9 948 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 ABCB11O95342 1321 aa13.33□□□□□ -0.28
SLC38A1-202ENST00000439706 GOLGA8IPA6NC78 632 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 GOLGA8JA6NMD2 632 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 NEFHP12036 1026 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 SCNN1DP51172 638 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 MUM1Q2TAK8 710 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 FAM43BQ6ZT52 329 aaPredicted RBP13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 PPM1KQ8N3J5 372 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 RASGEF1CQ8N431 466 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 CCDC127Q96BQ5 260 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 SETDB2Q96T68 719 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 TSC22D3Q99576 134 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 TRIM7Q9C029 511 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 MYH1P12882 1939 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 MYH4Q9Y623 1939 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 RASA4BC9J798 803 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 RASA4O43374 803 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 KRT15P19012 456 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 IRX1P78414 480 aaPredicted RBP13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 KRT17Q04695 432 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 MGAT5Q09328 741 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 SETDB1Q15047 1291 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 SGO2Q562F6 1265 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 RNF220Q5VTB9 566 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 GSTA5Q7RTV2 222 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 ECHDC2Q86YB7 292 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 TBC1D22AQ8WUA7 517 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 MYLK2Q9H1R3 596 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 KLHL11Q9NVR0 708 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 USTQ9Y2C2 406 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 GOLGA8RI6L899 631 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 LMNB1P20700 586 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 DLG4P78352 724 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 MFSD14BQ5SR56 506 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 TMEM154Q6P9G4 183 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 MAGEC3Q8TD91 643 aa13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 KLF6Q99612 283 aaPredicted RBP13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 DDX50Q9BQ39 737 aaKnown RBP13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 G3BP2Q9UN86 482 aaKnown RBP13.32□□□□□ -0.28
SLC38A1-202ENST00000439706 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
SLC38A1-202ENST00000439706 GOLGA8SH3BPF8 625 aa13.31□□□□□ -0.28
SLC38A1-202ENST00000439706 GOLGA8MH3BSY2 632 aa13.31□□□□□ -0.28
SLC38A1-202ENST00000439706 PHF2O75151 1096 aa13.31□□□□□ -0.28
SLC38A1-202ENST00000439706 SMNDC1O75940 238 aaKnown RBP eCLIP13.31□□□□□ -0.28
SLC38A1-202ENST00000439706 LINGO3P0C6S8 592 aa13.31□□□□□ -0.28
SLC38A1-202ENST00000439706 NEDD1Q8NHV4 660 aa13.31□□□□□ -0.28
SLC38A1-202ENST00000439706 RPS6KC1Q96S38 1066 aa13.31□□□□□ -0.28
SLC38A1-202ENST00000439706 CHST7Q9NS84 486 aa13.31□□□□□ -0.28
SLC38A1-202ENST00000439706 MTUS1Q9ULD2 1270 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms