RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 CHURC1-FNTBB4DL54 471 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 HRO43593 1189 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 ALDH2P05091 517 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 MAGEA9P43362 315 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 FNTBP49356 437 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 GLUD2P49448 558 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 DRP2Q13474 957 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 AASDHQ4L235 1098 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-208ENST00000439029 CEP55Q53EZ4 464 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 ELMSAN1Q6PJG2 1045 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 CATIPQ7Z7H3 387 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 RAB11FIP4Q86YS3 637 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 CCDC82Q8N4S0 544 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 SRBD1Q8N5C6 995 aaKnown RBP11.03□□□□□ -0.64
SMPD4-208ENST00000439029 CELF5Q8N6W0 485 aaKnown RBP11.03□□□□□ -0.64
SMPD4-208ENST00000439029 LINC01465Q8N7H1 131 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 ITFG1Q8TB96 612 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 DDX1Q92499 740 aaKnown RBP11.03□□□□□ -0.64
SMPD4-208ENST00000439029 FGF13Q92913 245 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 FAM193BQ96PV7 902 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-208ENST00000439029 HERC2P3Q9BVR0 1158 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 HEBP1Q9NRV9 189 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 FAM105AQ9NUU6 356 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 GABBR1Q9UBS5 961 aa11.03□□□□□ -0.64
SMPD4-208ENST00000439029 PIN4Q9Y237 131 aaKnown RBP11.03□□□□□ -0.64
SMPD4-208ENST00000439029 SETXQ7Z333 2677 aaKnown RBP11.03□□□□□ -0.64
SMPD4-208ENST00000439029 MYH9P35579 1960 aaKnown RBP11.03□□□□□ -0.64
SMPD4-208ENST00000439029 SHISA7A6NL88 538 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 NCAM2O15394 837 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 MAGEB2O15479 319 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 RXRAP19793 462 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 TMOD1P28289 359 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 ZNF76P36508 570 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 OR1G1P47890 313 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 RING1Q06587 406 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 HEATR6Q6AI08 1181 aaKnown RBP11.02□□□□□ -0.65
SMPD4-208ENST00000439029 LRSAM1Q6UWE0 723 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 HEATR3Q7Z4Q2 680 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 CTCFLQ8NI51 663 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-208ENST00000439029 URGCPQ8TCY9 931 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 ING5Q8WYH8 240 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 DSCC1Q9BVC3 393 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 PHF20Q9BVI0 1012 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 SPZ1Q9BXG8 430 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 FAM126AQ9BYI3 521 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-208ENST00000439029 RHOBTB2Q9BYZ6 727 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 PLA2G2FQ9BZM2 168 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 DIAPH3Q9NSV4 1193 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 DPP7Q9UHL4 492 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 RCAN3Q9UKA8 241 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 POLIQ9UNA4 740 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 LHX6Q9UPM6 363 aa11.02□□□□□ -0.65
SMPD4-208ENST00000439029 A0A087WZ62 844 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 MEIS1O00470 390 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 CCL16O15467 120 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 DHX15O43143 795 aaKnown RBP11.01□□□□□ -0.65
SMPD4-208ENST00000439029 LRP3O75074 770 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 KCNK5O95279 499 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 TOP3BO95985 862 aaKnown RBP11.01□□□□□ -0.65
SMPD4-208ENST00000439029 HOXC13P31276 330 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 RPS9P46781 194 aaKnown RBP11.01□□□□□ -0.65
SMPD4-208ENST00000439029 PFKPQ01813 784 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 SATB1Q01826 763 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 ADCY1Q08828 1119 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 FOXC1Q12948 553 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 TRDNQ13061 729 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 RSPO2Q6UXX9 243 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-208ENST00000439029 ZNF852Q6ZMS4 543 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 AGMOQ6ZNB7 445 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 PLA2G4DQ86XP0 818 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 MAP4K1Q92918 833 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 NELL2Q99435 816 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 FDXACB1Q9BRP7 624 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-208ENST00000439029 IL25Q9H293 177 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 SMOC1Q9H4F8 434 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 LY9Q9HBG7 655 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 RXFP1Q9HBX9 757 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 CHST12Q9NRB3 414 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 ZDHHC7Q9NXF8 308 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 PCDHB2Q9Y5E7 798 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 MAFBQ9Y5Q3 323 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-208ENST00000439029 TAF6LQ9Y6J9 622 aa11.01□□□□□ -0.65
SMPD4-208ENST00000439029 MTCL1Q9Y4B5 1905 aaKnown RBP11.01□□□□□ -0.65
SMPD4-208ENST00000439029 FLNBO75369 2602 aaKnown RBP11.01□□□□□ -0.65
SMPD4-208ENST00000439029 ASPMQ8IZT6 3477 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 CARNS1A5YM72 827 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 SRRM3A6NNA2 597 aaPredicted RBP11□□□□□ -0.65
SMPD4-208ENST00000439029 TM4SF5O14894 197 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 AXIN1O15169 862 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 ZMYND10O75800 440 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 NRLP54845 237 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 PSAPL1Q6NUJ1 521 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 MTSS1LQ765P7 747 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 ZNF654Q8IZM8 581 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 FAM160A2Q8N612 972 aaPredicted RBP11□□□□□ -0.65
SMPD4-208ENST00000439029 C12orf50Q8NA57 414 aaPredicted RBP11□□□□□ -0.65
SMPD4-208ENST00000439029 RABGGTAQ92696 567 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 SH2D3AQ9BRG2 576 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 TMEM175Q9BSA9 504 aa11□□□□□ -0.65
SMPD4-208ENST00000439029 ANO3Q9BYT9 981 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms