RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PIGOQ8TEQ8 1089 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 RFFLQ8WZ73 363 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 HOMER3Q9NSC5 361 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 KLHL14Q9P2G3 628 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 ARL2BPQ9Y2Y0 163 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 UBAP1LF5GYI3 381 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 CAMTA2O94983 1202 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 CLSTN1O94985 981 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 OAS1P00973 400 aaKnown RBP14.39□□□□□ -0.11
ACTN1-204ENST00000438964 INTS5Q6P9B9 1019 aaKnown RBP14.39□□□□□ -0.11
ACTN1-204ENST00000438964 SLC30A9Q6PML9 568 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 TAOK1Q7L7X3 1001 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 DTX3LQ8TDB6 740 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 KIAA1683Q9H0B3 1180 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 PAPOLBQ9NRJ5 636 aaKnown RBP14.39□□□□□ -0.11
ACTN1-204ENST00000438964 ETAA1Q9NY74 926 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 ZNF142P52746 1687 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-204ENST00000438964 WDR91A4D1P6 747 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 COMTP21964 271 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 TEKT4Q8WW24 435 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 DDX50Q9BQ39 737 aaKnown RBP14.39□□□□□ -0.11
ACTN1-204ENST00000438964 PITPNM3Q9BZ71 974 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 RASAL2Q9UJF2 1139 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 KIF3CO14782 793 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 CLDN3O15551 220 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 GNA14O95837 355 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 KNOP1Q1ED39 458 aaKnown RBP14.38□□□□□ -0.11
ACTN1-204ENST00000438964 SBK1Q52WX2 424 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 PPP1R15BQ5SWA1 713 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 RFWD3Q6PCD5 774 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 INTS8Q75QN2 995 aaKnown RBP14.38□□□□□ -0.11
ACTN1-204ENST00000438964 COL23A1Q86Y22 540 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-204ENST00000438964 OLIG1Q8TAK6 271 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 CNKSR1Q969H4 720 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 IFT74Q96LB3 600 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 SPZ1Q9BXG8 430 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 C12orf65Q9H3J6 166 aaKnown RBP14.38□□□□□ -0.11
ACTN1-204ENST00000438964 BTG4Q9NY30 223 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 C2CD2Q9Y426 696 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 LDHBP07195 334 aaKnown RBP14.38□□□□□ -0.11
ACTN1-204ENST00000438964 TMED2Q15363 201 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 PRR16Q569H4 304 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 ASRGL1Q7L266 308 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 FAM13CQ8NE31 585 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 RPGRQ92834 1020 aaKnown RBP14.38□□□□□ -0.11
ACTN1-204ENST00000438964 KAT5Q92993 513 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 BHMT2Q9H2M3 363 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 RXFP1Q9HBX9 757 aa14.38□□□□□ -0.11
ACTN1-204ENST00000438964 FOXN3O00409 490 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-204ENST00000438964 PHF2O75151 1096 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 PEX11AO75192 247 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 FTLP02792 175 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-204ENST00000438964 RAB27AP51159 221 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 PPATQ06203 517 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 RBBP5Q15291 538 aaKnown RBP14.37□□□□□ -0.11
ACTN1-204ENST00000438964 APBB1IPQ7Z5R6 666 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-204ENST00000438964 FBXO33Q7Z6M2 555 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 FBF1Q8TES7 1133 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 RGL1Q9NZL6 768 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 TOGARAM1Q9Y4F4 1720 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 BTNL10A8MVZ5 291 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 TISP43B9A030 160 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 USP17L10C9JJH3 530 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 CHMP2AO43633 222 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 GJC1P36383 396 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 PTDSS1P48651 473 aaKnown RBP14.37□□□□□ -0.11
ACTN1-204ENST00000438964 PAPOLAP51003 745 aaKnown RBP14.37□□□□□ -0.11
ACTN1-204ENST00000438964 JAM2P57087 298 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 RRP1BQ14684 758 aaKnown RBP14.37□□□□□ -0.11
ACTN1-204ENST00000438964 C10orf76Q5T2E6 689 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 CATSPER3Q86XQ3 398 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 C4orf33Q8N1A6 199 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 DHX36Q9H2U1 1008 aaKnown RBP14.37□□□□□ -0.11
ACTN1-204ENST00000438964 ALG13Q9NP73 1137 aaKnown RBP14.37□□□□□ -0.11
ACTN1-204ENST00000438964 AAASQ9NRG9 546 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 CCDC87Q9NVE4 849 aa14.37□□□□□ -0.11
ACTN1-204ENST00000438964 BZW2Q9Y6E2 419 aaKnown RBP14.37□□□□□ -0.11
ACTN1-204ENST00000438964 A6NHS1 94 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 SPOPO43791 374 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 SOX5P35711 763 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 ZNF131P52739 623 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 CALCOCO2Q13137 446 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 SEMA3FQ13275 785 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 ITPK1Q13572 414 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 HEMGNQ9BXL5 484 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 NT5C3AQ9H0P0 336 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 COL5A2P05997 1499 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-204ENST00000438964 ASTN1O14525 1302 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 THAP12O43422 761 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 UNC5CO95185 931 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 PYGLP06737 847 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 NEFHP12036 1026 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 PECAM1P16284 738 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-204ENST00000438964 GIT2Q14161 759 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 PDIA5Q14554 519 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 MUM1Q2TAK8 710 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 LLGL2Q6P1M3 1020 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 TAB3Q8N5C8 712 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-204ENST00000438964 CYP2W1Q8TAV3 490 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 FAM84AQ96KN4 292 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms