RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SLITRK3O94933 977 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 ACOT2P49753 483 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 BTNL9Q6UXG8 535 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 ARFGAP2Q8N6H7 521 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 SLC38A10Q9HBR0 1119 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 RNF14Q9UBS8 474 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 PRKAG2Q9UGJ0 569 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 PHKA2P46019 1235 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 CASP4P49662 377 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 EMC2Q15006 297 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 SAMD3Q8N6K7 520 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 MAIP1Q8WWC4 291 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 MAGOHBQ96A72 148 aaKnown RBP12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 DUSP9Q99956 384 aaKnown RBP12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 MRPL4Q9BYD3 311 aaKnown RBP12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 KCNMB3Q9NPA1 279 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 RAB21Q9UL25 225 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 GOLGA8SH3BPF8 625 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 ZBTB39O15060 712 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 RNF40O75150 1001 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 PGM5Q15124 567 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 SNRNP35Q16560 246 aaKnown RBP12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 RNF10Q8N5U6 811 aaKnown RBP12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 RDM1Q8NG50 284 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 CABS1Q96KC9 395 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 MKNK1Q9BUB5 465 aa12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 AGO4Q9HCK5 861 aaKnown RBP12.44□□□□□ -0.42
TRAPPC9-202ENST00000438773 SSU72P8A0A1W2PR75 194 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 HEXIM1O94992 359 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 PGK2P07205 417 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 SOX5P35711 763 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 TRPM4Q8TD43 1214 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 MGARPQ8TDB4 240 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 C2orf40Q9H1Z8 148 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 PLAGL2Q9UPG8 496 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 EZRP15311 586 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 MUTP22033 750 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 CIITAP33076 1130 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 NFX1Q12986 1120 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 DGKZQ13574 1117 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 SCYL2Q6P3W7 929 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 TMEM270Q6UE05 265 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 RHOT2Q8IXI1 618 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 TRIM11Q96F44 468 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 MMTAG2Q9BU76 263 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 EPB41L5Q9HCM4 733 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 IGKV6D-41A0A0C4DH26 115 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 STAM2O75886 525 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 RNF8O76064 485 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 CALRP27797 417 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 PBX1P40424 430 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 ARHGAP25P42331 645 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 E2F5Q15329 346 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 SLC18A3Q16572 532 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 RPUSD2Q8IZ73 545 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 TTC16Q8NEE8 873 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 GPRC5AQ8NFJ5 357 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 RAB20Q9NX57 234 aa12.43□□□□□ -0.42
TRAPPC9-202ENST00000438773 NCK2O43639 380 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 KLRC4O43908 158 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 CYP3A4P08684 503 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 EFNA5P52803 228 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 TAF1CQ15572 869 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 SCFD2Q8WU76 684 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 HNRNPLLQ8WVV9 542 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 PSD3Q9NYI0 1048 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 APEX2Q9UBZ4 518 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 XPOTO43592 962 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 FTLP02792 175 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 ATP1A1P05023 1023 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 HADHQ16836 314 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 ZNF667Q5HYK9 610 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 CEP85LQ5SZL2 805 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 NFRKBQ6P4R8 1299 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 ZNF354CQ86Y25 554 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 GLIS3Q8NEA6 775 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 SLC5A5Q92911 643 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 PBKQ96KB5 322 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 RPS6KC1Q96S38 1066 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 SPATC1LQ9H0A9 340 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 MYH2Q9UKX2 1941 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 ADAMTS3O15072 1205 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 AKAP3O75969 853 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 PLEKP08567 350 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 RPSAP08865 295 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 KAZNQ674X7 775 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 LRRC31Q6UY01 552 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 ZNF720Q7Z2F6 126 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 RSPH3Q86UC2 560 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 C7orf31Q8N865 590 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 SPATA20Q8TB22 786 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 STMN4Q9H169 189 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 SMARCAD1Q9H4L7 1026 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 MRPL47Q9HD33 250 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 SUCLA2Q9P2R7 463 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 PACSIN2Q9UNF0 486 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 COL16A1Q07092 1604 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 PIK3CDO00329 1044 aa12.42□□□□□ -0.42
TRAPPC9-202ENST00000438773 EVI5O60447 810 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms