RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 PSPC1Q8WXF1 523 aaKnown RBP20.3■□□□□ 0.84
GTF3A-204ENST00000438571 SMOC2Q9H3U7 446 aa20.3■□□□□ 0.84
GTF3A-204ENST00000438571 TSHZ2Q9NRE2 1034 aa20.3■□□□□ 0.84
GTF3A-204ENST00000438571 C2CD4DB7Z1M9 353 aa20.29■□□□□ 0.84
GTF3A-204ENST00000438571 TBX3O15119 743 aa20.29■□□□□ 0.84
GTF3A-204ENST00000438571 SKIP12755 728 aa20.29■□□□□ 0.84
GTF3A-204ENST00000438571 HOXB8P17481 243 aaPredicted RBP20.29■□□□□ 0.84
GTF3A-204ENST00000438571 RFC5P40937 340 aa20.29■□□□□ 0.84
GTF3A-204ENST00000438571 MRE11P49959 708 aa20.29■□□□□ 0.84
GTF3A-204ENST00000438571 VCPP55072 806 aaKnown RBP20.29■□□□□ 0.84
GTF3A-204ENST00000438571 RNASELQ05823 741 aaKnown RBP20.29■□□□□ 0.84
GTF3A-204ENST00000438571 SIGLEC14Q08ET2 396 aa20.29■□□□□ 0.84
GTF3A-204ENST00000438571 XKR9Q5GH70 373 aa20.29■□□□□ 0.84
GTF3A-204ENST00000438571 DDX53Q86TM3 631 aaKnown RBP20.29■□□□□ 0.84
GTF3A-204ENST00000438571 FERMT3Q86UX7 667 aa20.29■□□□□ 0.84
GTF3A-204ENST00000438571 MARCH6O60337 910 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 JAK2O60674 1132 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 DKC1O60832 514 aaKnown RBP eCLIP20.28■□□□□ 0.84
GTF3A-204ENST00000438571 PDGFBP01127 241 aaPredicted RBP20.28■□□□□ 0.84
GTF3A-204ENST00000438571 POMCP01189 267 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 XBP1P17861 261 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 KRT2P35908 639 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 ST3GAL1Q11201 340 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 PTPN14Q15678 1187 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 SRGAP1Q7Z6B7 1085 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 RNF149Q8NC42 400 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 SMG8Q8ND04 991 aaKnown RBP20.28■□□□□ 0.84
GTF3A-204ENST00000438571 SLC22A17Q8WUG5 538 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 MTRQ99707 1265 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 EIF2AQ9BY44 585 aaKnown RBP20.28■□□□□ 0.84
GTF3A-204ENST00000438571 KCNH6Q9H252 994 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 ADAM7Q9H2U9 754 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 RSAD1Q9HA92 442 aa20.28■□□□□ 0.84
GTF3A-204ENST00000438571 VWA8A3KMH1 1905 aa20.27■□□□□ 0.84
GTF3A-204ENST00000438571 A0A087WWV3 80 aa20.27■□□□□ 0.84
GTF3A-204ENST00000438571 SLITRK3O94933 977 aa20.27■□□□□ 0.84
GTF3A-204ENST00000438571 SSBP05455 408 aaKnown RBP eCLIP20.27■□□□□ 0.84
GTF3A-204ENST00000438571 TPRNQ4KMQ1 711 aa20.27■□□□□ 0.84
GTF3A-204ENST00000438571 MRPL10Q7Z7H8 261 aaKnown RBP20.27■□□□□ 0.84
GTF3A-204ENST00000438571 TPH2Q8IWU9 490 aa20.27■□□□□ 0.84
GTF3A-204ENST00000438571 NSUN7Q8NE18 718 aaKnown RBP20.27■□□□□ 0.84
GTF3A-204ENST00000438571 ASAP3Q8TDY4 903 aa20.27■□□□□ 0.84
GTF3A-204ENST00000438571 GTF3C6Q969F1 213 aa20.27■□□□□ 0.84
GTF3A-204ENST00000438571 PGBD4Q96DM1 585 aa20.27■□□□□ 0.84
GTF3A-204ENST00000438571 CPB2Q96IY4 423 aa20.27■□□□□ 0.84
GTF3A-204ENST00000438571 EIF2AK1Q9BQI3 630 aaKnown RBP20.27■□□□□ 0.84
GTF3A-204ENST00000438571 TSPAN1O60635 241 aa20.26■□□□□ 0.83
GTF3A-204ENST00000438571 FBXL6Q8N531 539 aa20.26■□□□□ 0.83
GTF3A-204ENST00000438571 URGCPQ8TCY9 931 aa20.26■□□□□ 0.83
GTF3A-204ENST00000438571 RNF39Q9H2S5 420 aa20.26■□□□□ 0.83
GTF3A-204ENST00000438571 ZSWIM4Q9H7M6 989 aa20.26■□□□□ 0.83
GTF3A-204ENST00000438571 MARCH5Q9NX47 278 aa20.26■□□□□ 0.83
GTF3A-204ENST00000438571 HES2Q9Y543 173 aa20.26■□□□□ 0.83
GTF3A-204ENST00000438571 PPME1Q9Y570 386 aa20.26■□□□□ 0.83
GTF3A-204ENST00000438571 IRAK3Q9Y616 596 aa20.26■□□□□ 0.83
GTF3A-204ENST00000438571 BTBD18B2RXH4 712 aa20.25■□□□□ 0.83
GTF3A-204ENST00000438571 F8W810 466 aa20.25■□□□□ 0.83
GTF3A-204ENST00000438571 NCLP19338 710 aaKnown RBP20.25■□□□□ 0.83
GTF3A-204ENST00000438571 ITIH3Q06033 890 aa20.25■□□□□ 0.83
GTF3A-204ENST00000438571 TCF15Q12870 199 aa20.25■□□□□ 0.83
GTF3A-204ENST00000438571 CAPSQ13938 189 aa20.25■□□□□ 0.83
GTF3A-204ENST00000438571 KIAA1841Q6NSI8 718 aa20.25■□□□□ 0.83
GTF3A-204ENST00000438571 CES5AQ6NT32 575 aa20.25■□□□□ 0.83
GTF3A-204ENST00000438571 ZBTB33Q86T24 672 aa20.25■□□□□ 0.83
GTF3A-204ENST00000438571 SUGP1Q8IWZ8 645 aaKnown RBP20.25■□□□□ 0.83
GTF3A-204ENST00000438571 SLFN12Q8IYM2 578 aa20.25■□□□□ 0.83
GTF3A-204ENST00000438571 TCP11Q8WWU5 503 aa20.25■□□□□ 0.83
GTF3A-204ENST00000438571 NAP1L4Q99733 375 aaKnown RBP20.25■□□□□ 0.83
GTF3A-204ENST00000438571 IPPQ9Y573 584 aa20.25■□□□□ 0.83
GTF3A-204ENST00000438571 NRP1O14786 923 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 BRD1O95696 1058 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 ASGR2P07307 311 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 ANAPC15P60006 121 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 PTENP60484 403 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 AMHR2Q16671 573 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 TMC5Q6UXY8 1006 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 OTUD6AQ7L8S5 288 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 CDR2LQ86X02 465 aaPredicted RBP20.24■□□□□ 0.83
GTF3A-204ENST00000438571 KREMEN2Q8NCW0 462 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 RSPH1Q8WYR4 309 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 WASF1Q92558 559 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 KLHL5Q96PQ7 755 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 MIOSQ9NXC5 875 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 PRG3Q9Y2Y8 225 aaPredicted RBP20.24■□□□□ 0.83
GTF3A-204ENST00000438571 CNTNAP2Q9UHC6 1331 aa20.24■□□□□ 0.83
GTF3A-204ENST00000438571 POTEMA6NI47 508 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 GAS2O43903 313 aaKnown RBP20.23■□□□□ 0.83
GTF3A-204ENST00000438571 ERLIN2O94905 339 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 BAG4O95429 457 aaKnown RBP20.23■□□□□ 0.83
GTF3A-204ENST00000438571 CNPP09543 421 aaKnown RBP20.23■□□□□ 0.83
GTF3A-204ENST00000438571 MLH1P40692 756 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 MTHFRP42898 656 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 MBTD1Q05BQ5 628 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 CALCRLQ16602 461 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 TAS1R1Q7RTX1 841 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 DIS3L2Q8IYB7 885 aaKnown RBP20.23■□□□□ 0.83
GTF3A-204ENST00000438571 ZFP42Q96MM3 310 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 NECTIN4Q96NY8 510 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 GAD1Q99259 594 aa20.23■□□□□ 0.83
GTF3A-204ENST00000438571 HSD17B14Q9BPX1 270 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms