RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 DNAJB1P25685 340 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 BMPR1AP36894 532 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 DNM2P50570 870 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 GNL2Q13823 731 aaKnown RBP9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 CAPSQ13938 189 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 TMEM164Q5U3C3 297 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 LRRC55Q6ZSA7 311 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 IGSF22Q8N9C0 903 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 PSPC1Q8WXF1 523 aaKnown RBP9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 SLC7A3Q8WY07 619 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 BSNDQ8WZ55 320 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 MRRFQ96E11 262 aaKnown RBP9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 SAMD11Q96NU1 681 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 MTRQ99707 1265 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 MMTAG2Q9BU76 263 aaKnown RBP9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 POLR3CQ9BUI4 534 aaPredicted RBP9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 COL25A1Q9BXS0 654 aaPredicted RBP9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 TUFT1Q9NNX1 390 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 TMEM161AQ9NX61 479 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 LMCD1Q9NZU5 365 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 THEGQ9P2T0 379 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 NOL7Q9UMY1 257 aaKnown RBP9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 PPME1Q9Y570 386 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 SPTBN5Q9NRC6 3674 aaKnown RBP9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 C5orf42Q9H799 3197 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 CITO14578 2027 aa9.51□□□□□ -0.89
HERPUD2-206ENST00000438224 TBKBP1A7MCY6 615 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 ITGB1P05556 798 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 GLRA2P23416 452 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 RPA1P27694 616 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 CDC25AP30304 524 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 HOXA11P31270 313 aaPredicted RBP9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 ARL2P36404 184 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 GCGRP47871 477 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 ATP2C1P98194 919 aaPredicted RBP9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 ODR4Q5SWX8 454 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 DNAJC14Q6Y2X3 702 aaPredicted RBP9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 OTUD6AQ7L8S5 288 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 KCNK18Q7Z418 384 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 RNF149Q8NC42 400 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 EPS8L1Q8TE68 723 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 LPPQ93052 612 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 MRPL38Q96DV4 380 aaKnown RBP9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 CASD1Q96PB1 797 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 JPH2Q9BR39 696 aaPredicted RBP9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 CWH43Q9H720 699 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 ELAC1Q9H777 363 aaKnown RBP9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 ATP6V0A4Q9HBG4 840 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 POLD4Q9HCU8 107 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 ALG13Q9NP73 1137 aaKnown RBP9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 AGPAT5Q9NUQ2 364 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 KIAA1522Q9P206 1035 aaPredicted RBP9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 DBR1Q9UK59 544 aaKnown RBP9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 LRFN2Q9ULH4 789 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 ZMIZ1Q9ULJ6 1067 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 PIN4Q9Y237 131 aaKnown RBP9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 PCDHB7Q9Y5E2 793 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 PCDHGC5Q9Y5F6 944 aa9.5□□□□□ -0.89
HERPUD2-206ENST00000438224 PDCD11Q14690 1871 aaKnown RBP9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 TCHHQ07283 1943 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 A0A0U1RQF3 1178 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 H3BQV1 296 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 B4GALT5O43286 388 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 GAS2O43903 313 aaKnown RBP9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 B4GALT3O60512 393 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 DGAT1O75907 488 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 CSPG5O95196 566 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 EDN1P05305 212 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 RB1P06400 928 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 XRCC6P12956 609 aaKnown RBP eCLIP9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 SFPQP23246 707 aaKnown RBP eCLIP9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 IRS1P35568 1242 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 CCT6AP40227 531 aaKnown RBP9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 PBX3P40426 434 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 PHKA2P46019 1235 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 KCNQ1P51787 676 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 PTENP60484 403 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 LONRF3Q496Y0 759 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 TCEAL5Q5H9L2 206 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 UBXN11Q5T124 520 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 LARP1BQ659C4 914 aaKnown RBP9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 MAEAQ7L5Y9 396 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 CATSPER4Q7RTX7 472 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 SRGAP1Q7Z6B7 1085 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 KLHL23Q8NBE8 558 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 COLGALT1Q8NBJ5 622 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 RNF169Q8NCN4 708 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 SPPL3Q8TCT6 385 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 HELQQ8TDG4 1101 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 LRRC15Q8TF66 581 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 STK32AQ8WU08 396 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 TCP11Q8WWU5 503 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 TMEM117Q9H0C3 514 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 POLR3FQ9H1D9 316 aaPredicted RBP9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 TYW1Q9NV66 732 aaKnown RBP9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 LRWD1Q9UFC0 647 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 PLAGL2Q9UPG8 496 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 KIF3AQ9Y496 699 aa9.49□□□□□ -0.89
HERPUD2-206ENST00000438224 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms