RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 BMP5P22003 454 aa5.67□□□□□ -1.5
PTPN4-205ENST00000433888 LY6G5CQ5SRR4 150 aa5.67□□□□□ -1.5
PTPN4-205ENST00000433888 ZBTB41Q5SVQ8 909 aa5.67□□□□□ -1.5
PTPN4-205ENST00000433888 LRRC55Q6ZSA7 311 aa5.67□□□□□ -1.5
PTPN4-205ENST00000433888 NXPE1Q8N323 547 aa5.67□□□□□ -1.5
PTPN4-205ENST00000433888 EFHBQ8N7U6 833 aa5.67□□□□□ -1.5
PTPN4-205ENST00000433888 OR52N2Q8NGI0 321 aa5.67□□□□□ -1.5
PTPN4-205ENST00000433888 PROKR1Q8TCW9 393 aa5.67□□□□□ -1.5
PTPN4-205ENST00000433888 LSM14BQ9BX40 385 aaKnown RBP5.67□□□□□ -1.5
PTPN4-205ENST00000433888 CPEB1Q9BZB8 566 aaKnown RBP5.67□□□□□ -1.5
PTPN4-205ENST00000433888 ZKSCAN5Q9Y2L8 839 aa5.67□□□□□ -1.5
PTPN4-205ENST00000433888 TRIM24O15164 1050 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 PPFIA2O75334 1257 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 PCDH8O95206 1070 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 LY86O95711 162 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 ABHD16AO95870 558 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 LMNAP02545 664 aaKnown RBP5.66□□□□□ -1.5
PTPN4-205ENST00000433888 PFKMP08237 780 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 CD40P25942 277 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 CASRP41180 1078 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 MRPL49Q13405 166 aaKnown RBP5.66□□□□□ -1.5
PTPN4-205ENST00000433888 DPY19L2P1Q6NXN4 242 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 TAS1R1Q7RTX1 841 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 SYNE4Q8N205 404 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 CPT1CQ8TCG5 803 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 CHTF18Q8WVB6 975 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 CPPED1Q9BRF8 314 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-205ENST00000433888 FDXACB1Q9BRP7 624 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-205ENST00000433888 IFT57Q9NWB7 429 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 PACSIN3Q9UKS6 424 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 PCDHB6Q9Y5E3 794 aa5.66□□□□□ -1.5
PTPN4-205ENST00000433888 COL11A2P13942 1736 aaPredicted RBP5.65□□□□□ -1.5
PTPN4-205ENST00000433888 ZNF891A8MT65 544 aaPredicted RBP5.65□□□□□ -1.5
PTPN4-205ENST00000433888 NRP1O14786 923 aa5.65□□□□□ -1.5
PTPN4-205ENST00000433888 PTPAQ15257 358 aa5.65□□□□□ -1.5
PTPN4-205ENST00000433888 VPS72Q15906 364 aa5.65□□□□□ -1.5
PTPN4-205ENST00000433888 PLEKHG4Q58EX7 1191 aa5.65□□□□□ -1.5
PTPN4-205ENST00000433888 GPRIN1Q7Z2K8 1008 aa5.65□□□□□ -1.5
PTPN4-205ENST00000433888 FAM83AQ86UY5 434 aa5.65□□□□□ -1.5
PTPN4-205ENST00000433888 CDYL2Q8N8U2 506 aa5.65□□□□□ -1.5
PTPN4-205ENST00000433888 PODXL2Q9NZ53 605 aa5.65□□□□□ -1.5
PTPN4-205ENST00000433888 DKK2Q9UBU2 259 aa5.65□□□□□ -1.5
PTPN4-205ENST00000433888 TMPRSS11EQ9UL52 423 aa5.65□□□□□ -1.5
PTPN4-205ENST00000433888 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.65□□□□□ -1.5
PTPN4-205ENST00000433888 A0A1W2PR48 441 aa5.64□□□□□ -1.51
PTPN4-205ENST00000433888 DNAJC6O75061 913 aa5.64□□□□□ -1.51
PTPN4-205ENST00000433888 RHOBTB3O94955 611 aa5.64□□□□□ -1.51
PTPN4-205ENST00000433888 SCAF4O95104 1147 aaKnown RBP5.64□□□□□ -1.51
PTPN4-205ENST00000433888 FBLP22087 321 aaKnown RBP5.64□□□□□ -1.51
PTPN4-205ENST00000433888 FAM189BP81408 668 aa5.64□□□□□ -1.51
PTPN4-205ENST00000433888 CSRP2Q16527 193 aa5.64□□□□□ -1.51
PTPN4-205ENST00000433888 GPR158Q5T848 1215 aa5.64□□□□□ -1.51
PTPN4-205ENST00000433888 DOK3Q7L591 496 aa5.64□□□□□ -1.51
PTPN4-205ENST00000433888 SYNPOQ8N3V7 929 aa5.64□□□□□ -1.51
PTPN4-205ENST00000433888 MSL3Q8N5Y2 521 aaKnown RBP5.64□□□□□ -1.51
PTPN4-205ENST00000433888 LILRA3Q8N6C8 439 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-205ENST00000433888 MRFAP1L1Q96HT8 127 aa5.64□□□□□ -1.51
PTPN4-205ENST00000433888 NDC1Q9BTX1 674 aa5.64□□□□□ -1.51
PTPN4-205ENST00000433888 KCNH6Q9H252 994 aa5.64□□□□□ -1.51
PTPN4-205ENST00000433888 USP36Q9P275 1121 aaKnown RBP5.64□□□□□ -1.51
PTPN4-205ENST00000433888 TNFRSF18Q9Y5U5 241 aa5.64□□□□□ -1.51
PTPN4-205ENST00000433888 CENPVL1A0A0U1RR11 272 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 PPFIA4O75335 1185 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 RECQL4O94761 1208 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 WNT3AP56704 352 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 PHC1P78364 1004 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 KCNV1Q6PIU1 500 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 ESPNLQ6ZVH7 1005 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 PRIMA1Q86XR5 153 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 LYSMD2Q8IV50 215 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 SLC41A1Q8IVJ1 513 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 GLB1L3Q8NCI6 653 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-205ENST00000433888 OR5M3Q8NGP4 307 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 VOPP1Q96AW1 172 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 MYEOVQ96EZ4 313 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 IL17RAQ96F46 866 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 SLC46A2Q9BY10 475 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 TOR3AQ9H497 397 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 THG1LQ9NWX6 298 aaKnown RBP5.63□□□□□ -1.51
PTPN4-205ENST00000433888 MSRAQ9UJ68 235 aa5.63□□□□□ -1.51
PTPN4-205ENST00000433888 PRSS38A1L453 326 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 LCHNA4D1U4 455 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 TMEM200CA6NKL6 621 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 KPNA6O60684 536 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 GAS7O60861 476 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 GPR15P49685 360 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 PCBP1Q15365 356 aaKnown RBP eCLIP5.62□□□□□ -1.51
PTPN4-205ENST00000433888 TIGD2Q4W5G0 525 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 IQSEC1Q6DN90 963 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 SMC1BQ8NDV3 1235 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 NTN5Q8WTR8 489 aaPredicted RBP5.62□□□□□ -1.51
PTPN4-205ENST00000433888 GAB3Q8WWW8 586 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 SREK1Q8WXA9 508 aaKnown RBP5.62□□□□□ -1.51
PTPN4-205ENST00000433888 SYNPO2LQ9H987 977 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 USP18Q9UMW8 372 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 CHST2Q9Y4C5 530 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 CD2APQ9Y5K6 639 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 NUMBLQ9Y6R0 609 aa5.62□□□□□ -1.51
PTPN4-205ENST00000433888 LPXNO60711 386 aa5.61□□□□□ -1.51
PTPN4-205ENST00000433888 GYPEP15421 78 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms