RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 ZNF280BQ86YH2 543 aa16.65■□□□□ 0.26
PRKDC-203ENST00000432581 CEP170P1Q96L14 293 aa16.65■□□□□ 0.26
PRKDC-203ENST00000432581 FAM193BQ96PV7 902 aaPredicted RBP16.65■□□□□ 0.26
PRKDC-203ENST00000432581 VN1R3Q9BXE9 311 aa16.65■□□□□ 0.26
PRKDC-203ENST00000432581 SLKQ9H2G2 1235 aaPredicted RBP16.65■□□□□ 0.26
PRKDC-203ENST00000432581 DHX33Q9H6R0 707 aaKnown RBP16.65■□□□□ 0.26
PRKDC-203ENST00000432581 KCNMB3Q9NPA1 279 aa16.65■□□□□ 0.26
PRKDC-203ENST00000432581 VAV3Q9UKW4 847 aa16.65■□□□□ 0.26
PRKDC-203ENST00000432581 USP34Q70CQ2 3546 aa16.65■□□□□ 0.26
PRKDC-203ENST00000432581 CCDC194A0A1B0GVG4 234 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 KLRC2P26717 231 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 CLCN4P51793 760 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 NPEPPSP55786 919 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 LAMTOR4Q0VGL1 99 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 ASTLQ6HA08 431 aaPredicted RBP16.64■□□□□ 0.25
PRKDC-203ENST00000432581 KANK3Q6NY19 840 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 TMC5Q6UXY8 1006 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 CCDC149Q6ZUS6 474 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 OTOP3Q7RTS5 596 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 NEK8Q86SG6 692 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 CNNM3Q8NE01 707 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 TCP11Q8WWU5 503 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 PRPF31Q8WWY3 499 aaKnown RBP16.64■□□□□ 0.25
PRKDC-203ENST00000432581 KLHL5Q96PQ7 755 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 NAP1L4Q99733 375 aaKnown RBP16.64■□□□□ 0.25
PRKDC-203ENST00000432581 TM6SF1Q9BZW5 370 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 MFSD1Q9H3U5 465 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 UBN1Q9NPG3 1134 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 MRPL17Q9NRX2 175 aaKnown RBP16.64■□□□□ 0.25
PRKDC-203ENST00000432581 FAN1Q9Y2M0 1017 aa16.64■□□□□ 0.25
PRKDC-203ENST00000432581 WDR81Q562E7 1941 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 PROB1E7EW31 1015 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 TBX3O15119 743 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 ASAP2O43150 1006 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 B4GALT3O60512 393 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 CDKL5O76039 1030 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 DDHD2O94830 711 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 SRGAP2CP0DJJ0 459 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 XBP1P17861 261 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 PCBP1Q15365 356 aaKnown RBP eCLIP16.63■□□□□ 0.25
PRKDC-203ENST00000432581 C15orf39Q6ZRI6 1047 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 OTUD6AQ7L8S5 288 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 C4orf19Q8IY42 314 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 TMEM105Q8N8V8 129 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 TMEM143Q96AN5 459 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 AIFM3Q96NN9 605 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 PHF20Q9BVI0 1012 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 SMOC2Q9H3U7 446 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 SSX2IPQ9Y2D8 614 aa16.63■□□□□ 0.25
PRKDC-203ENST00000432581 MARCH6O60337 910 aa16.62■□□□□ 0.25
PRKDC-203ENST00000432581 CCNT1O60563 726 aaKnown RBP16.62■□□□□ 0.25
PRKDC-203ENST00000432581 LILRB3O75022 631 aa16.62■□□□□ 0.25
PRKDC-203ENST00000432581 SOD2P04179 222 aa16.62■□□□□ 0.25
PRKDC-203ENST00000432581 CNPP09543 421 aaKnown RBP16.62■□□□□ 0.25
PRKDC-203ENST00000432581 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
PRKDC-203ENST00000432581 HOXA11P31270 313 aaPredicted RBP16.62■□□□□ 0.25
PRKDC-203ENST00000432581 YWHABP31946 246 aaKnown RBP16.62■□□□□ 0.25
PRKDC-203ENST00000432581 CLCN5P51795 746 aa16.62■□□□□ 0.25
PRKDC-203ENST00000432581 STK3Q13188 491 aa16.62■□□□□ 0.25
PRKDC-203ENST00000432581 EPHA7Q15375 998 aa16.62■□□□□ 0.25
PRKDC-203ENST00000432581 UBXN11Q5T124 520 aa16.62■□□□□ 0.25
PRKDC-203ENST00000432581 ELMSAN1Q6PJG2 1045 aa16.62■□□□□ 0.25
PRKDC-203ENST00000432581 ZNF579Q8NAF0 562 aaKnown RBP16.62■□□□□ 0.25
PRKDC-203ENST00000432581 LXNQ9BS40 222 aa16.62■□□□□ 0.25
PRKDC-203ENST00000432581 MINDY3Q9H8M7 445 aa16.62■□□□□ 0.25
PRKDC-203ENST00000432581 WRAP73Q9P2S5 460 aaPredicted RBP16.62■□□□□ 0.25
PRKDC-203ENST00000432581 DPP7Q9UHL4 492 aa16.62■□□□□ 0.25
PRKDC-203ENST00000432581 KCNJ14Q9UNX9 436 aa16.62■□□□□ 0.25
PRKDC-203ENST00000432581 NRP1O14786 923 aa16.61■□□□□ 0.25
PRKDC-203ENST00000432581 ERLIN2O94905 339 aa16.61■□□□□ 0.25
PRKDC-203ENST00000432581 POMCP01189 267 aa16.61■□□□□ 0.25
PRKDC-203ENST00000432581 SSBP05455 408 aaKnown RBP eCLIP16.61■□□□□ 0.25
PRKDC-203ENST00000432581 URODP06132 367 aa16.61■□□□□ 0.25
PRKDC-203ENST00000432581 AXLP30530 894 aa16.61■□□□□ 0.25
PRKDC-203ENST00000432581 NCBP1Q09161 790 aaKnown RBP16.61■□□□□ 0.25
PRKDC-203ENST00000432581 EMC2Q15006 297 aa16.61■□□□□ 0.25
PRKDC-203ENST00000432581 FERMT3Q86UX7 667 aa16.61■□□□□ 0.25
PRKDC-203ENST00000432581 RNF149Q8NC42 400 aa16.61■□□□□ 0.25
PRKDC-203ENST00000432581 CMASQ8NFW8 434 aaPredicted RBP16.61■□□□□ 0.25
PRKDC-203ENST00000432581 CCDC51Q96ER9 411 aa16.61■□□□□ 0.25
PRKDC-203ENST00000432581 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
PRKDC-203ENST00000432581 HERC2P3Q9BVR0 1158 aa16.61■□□□□ 0.25
PRKDC-203ENST00000432581 ZSWIM4Q9H7M6 989 aa16.61■□□□□ 0.25
PRKDC-203ENST00000432581 INPPL1O15357 1258 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 ADH1AP07327 375 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 ITGA4P13612 1032 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 NBL1P41271 181 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 AFF1P51825 1210 aaKnown RBP16.6■□□□□ 0.25
PRKDC-203ENST00000432581 TDGQ13569 410 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 MXD4Q14582 209 aaPredicted RBP16.6■□□□□ 0.25
PRKDC-203ENST00000432581 NOTUMQ6P988 496 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 CYP26C1Q6V0L0 522 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 SLFN12Q8IYM2 578 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 HAS1Q92839 578 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 RPS6KC1Q96S38 1066 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 MTRQ99707 1265 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 RHOBTB2Q9BYZ6 727 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 BMP2KQ9NSY1 1161 aaPredicted RBP16.6■□□□□ 0.25
PRKDC-203ENST00000432581 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
PRKDC-203ENST00000432581 PTPRZ1P23471 2315 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms