RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 SLC30A5Q8TAD4 765 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 MAGOHBQ96A72 148 aaKnown RBP12.31□□□□□ -0.44
CLDN4-202ENST00000431918 OTUD5Q96G74 571 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 PBKQ96KB5 322 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 CAMKK2Q96RR4 588 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 NAP1L3Q99457 506 aaPredicted RBP12.31□□□□□ -0.44
CLDN4-202ENST00000431918 PLVAPQ9BX97 442 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 TEX13BQ9BXU2 312 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 POLR3FQ9H1D9 316 aaPredicted RBP12.31□□□□□ -0.44
CLDN4-202ENST00000431918 AIPL1Q9NZN9 384 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 RAB21Q9UL25 225 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 MYBL2P10244 700 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 HNRNPH3P31942 346 aaKnown RBP12.31□□□□□ -0.44
CLDN4-202ENST00000431918 SFNP31947 248 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 PASD1Q8IV76 773 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 HNRNPLLQ8WVV9 542 aaKnown RBP12.31□□□□□ -0.44
CLDN4-202ENST00000431918 SYNCQ9H7C4 482 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 ACP6Q9NPH0 428 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 PLCB1Q9NQ66 1216 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 TOPORSQ9NS56 1045 aaPredicted RBP12.31□□□□□ -0.44
CLDN4-202ENST00000431918 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.31□□□□□ -0.44
CLDN4-202ENST00000431918 SLC9A2Q9UBY0 812 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 TRPC6Q9Y210 931 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 FRMPD4Q14CM0 1322 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 PEX10O60683 326 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 CD19P15391 556 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 CNGA1P29973 690 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 CETN2P41208 172 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 GNGT1P63211 74 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
CLDN4-202ENST00000431918 ITGB3BPQ13352 177 aaPredicted RBP12.3□□□□□ -0.44
CLDN4-202ENST00000431918 KIAA1683Q9H0B3 1180 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 PCDHA2Q9Y5H9 948 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 KIAA0754O94854 1291 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 PLCB3Q01970 1234 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 ALCAMQ13740 583 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 KRT71Q3SY84 523 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 ZNF394Q53GI3 561 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 SCYL3Q8IZE3 742 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 SLC20A1Q8WUM9 679 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 KAT5Q92993 513 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 CDHR1Q96JP9 859 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 MKNK1Q9BUB5 465 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 THAP2Q9H0W7 228 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 PXMP2Q9NR77 195 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 RIPK3Q9Y572 518 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 TARSL2A2RTX5 802 aaKnown RBP12.3□□□□□ -0.44
CLDN4-202ENST00000431918 ZNF233A6NK53 670 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 BUB1BO60566 1050 aaPredicted RBP12.3□□□□□ -0.44
CLDN4-202ENST00000431918 CTNNA2P26232 953 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 TRPC3Q13507 836 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 SNX1Q13596 522 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 STXBP2Q15833 593 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 GIMAP7Q8NHV1 300 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 SLC16A10Q8TF71 515 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 EXOC4Q96A65 974 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 LRRC45Q96CN5 670 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 MBOAT7Q96N66 472 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 AGPAT1Q99943 283 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 ATP6V0A4Q9HBG4 840 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 HOXC10Q9NYD6 342 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 KCND2Q9NZV8 630 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 ASIC3Q9UHC3 531 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 HPCAL4Q9UM19 191 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 F8VZ95 297 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 VWA5AO00534 786 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 DDX3XO00571 662 aaKnown RBP eCLIP12.3□□□□□ -0.443e-9■■□□□ 13.2
CLDN4-202ENST00000431918 RAD51CO43502 376 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 PLTPP55058 493 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 PRKCEQ02156 737 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 PPP2R5AQ15172 486 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 UGCGQ16739 394 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 SEZ6Q53EL9 994 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 RNF187Q5TA31 235 aaPredicted RBP12.3□□□□□ -0.44
CLDN4-202ENST00000431918 ATRNL1Q5VV63 1379 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 KRT39Q6A163 491 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 GSTA5Q7RTV2 222 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 RBM46Q8TBY0 533 aaKnown RBP12.3□□□□□ -0.44
CLDN4-202ENST00000431918 RFFLQ8WZ73 363 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 MPHOSPH6Q99547 160 aaKnown RBP12.3□□□□□ -0.44
CLDN4-202ENST00000431918 SELENOSQ9BQE4 189 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 MOV10L1Q9BXT6 1211 aaKnown RBP12.3□□□□□ -0.44
CLDN4-202ENST00000431918 SLC38A10Q9HBR0 1119 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 PNMA2Q9UL42 364 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 ATP8A1Q9Y2Q0 1164 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 PCDHB4Q9Y5E5 795 aa12.3□□□□□ -0.44
CLDN4-202ENST00000431918 SART1O43290 800 aaKnown RBP12.29□□□□□ -0.44
CLDN4-202ENST00000431918 ATP2C2O75185 946 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 CD58P19256 250 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 C2CD6Q53TS8 623 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 FKBP1CQ5VVH2 108 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 PCNX4Q63HM2 1172 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 WDR93Q6P2C0 686 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 IVLP07476 585 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 NPTX2P47972 431 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 EMBQ6PCB8 327 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 MCPH1Q8NEM0 835 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 TPCN2Q8NHX9 752 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 CELF4Q9BZC1 486 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms